RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 CCL2P13500 99 aa17.64■□□□□ 0.41
CACNB3-218ENST00000550771 CFPP27918 469 aa17.64■□□□□ 0.41
CACNB3-218ENST00000550771 UCP2P55851 309 aa17.64■□□□□ 0.41
CACNB3-218ENST00000550771 MTPNP58546 118 aa17.64■□□□□ 0.41
CACNB3-218ENST00000550771 TEKQ02763 1124 aa17.64■□□□□ 0.41
CACNB3-218ENST00000550771 PLP2Q04941 152 aa17.64■□□□□ 0.41
CACNB3-218ENST00000550771 MOGQ16653 247 aa17.64■□□□□ 0.41
CACNB3-218ENST00000550771 TSPYL5Q86VY4 417 aaPredicted RBP17.64■□□□□ 0.41
CACNB3-218ENST00000550771 VANGL1Q8TAA9 524 aaPredicted RBP17.64■□□□□ 0.41
CACNB3-218ENST00000550771 ZNF418Q8TF45 676 aaPredicted RBP17.64■□□□□ 0.41
CACNB3-218ENST00000550771 MCHR2Q969V1 340 aa17.64■□□□□ 0.41
CACNB3-218ENST00000550771 TSPAN32Q96QS1 320 aa17.64■□□□□ 0.41
CACNB3-218ENST00000550771 SEPHS2Q99611 448 aa17.64■□□□□ 0.41
CACNB3-218ENST00000550771 TRIM33Q9UPN9 1127 aa17.64■□□□□ 0.41
CACNB3-218ENST00000550771 IQCMA0A1B0GVH7 501 aa17.63■□□□□ 0.41
CACNB3-218ENST00000550771 CDC14BO60729 498 aa17.63■□□□□ 0.41
CACNB3-218ENST00000550771 LCKP06239 509 aa17.63■□□□□ 0.41
CACNB3-218ENST00000550771 UMPSP11172 480 aa17.63■□□□□ 0.41
CACNB3-218ENST00000550771 CD247P20963 164 aa17.63■□□□□ 0.41
CACNB3-218ENST00000550771 PCGF2P35227 344 aa17.63■□□□□ 0.41
CACNB3-218ENST00000550771 CRYBB2P43320 205 aa17.63■□□□□ 0.41
CACNB3-218ENST00000550771 ZNF84P51523 738 aa17.63■□□□□ 0.41
CACNB3-218ENST00000550771 CLRN1P58418 232 aa17.63■□□□□ 0.41
CACNB3-218ENST00000550771 CCL8P80075 99 aa17.63■□□□□ 0.41
CACNB3-218ENST00000550771 SELPLGQ14242 412 aa17.63■□□□□ 0.41
CACNB3-218ENST00000550771 ACSM5Q6NUN0 579 aa17.63■□□□□ 0.41
CACNB3-218ENST00000550771 FAHD2BQ6P2I3 314 aaPredicted RBP17.63■□□□□ 0.41
CACNB3-218ENST00000550771 USP43Q70EL4 1123 aa17.63■□□□□ 0.41
CACNB3-218ENST00000550771 HDDC2Q7Z4H3 204 aa17.63■□□□□ 0.41
CACNB3-218ENST00000550771 NANOGNBQ7Z5D8 188 aa17.63■□□□□ 0.41
CACNB3-218ENST00000550771 RBM15BQ8NDT2 890 aaKnown RBP17.63■□□□□ 0.41
CACNB3-218ENST00000550771 TAMM41Q96BW9 452 aa17.63■□□□□ 0.41
CACNB3-218ENST00000550771 FAHD2AQ96GK7 314 aa17.63■□□□□ 0.41
CACNB3-218ENST00000550771 MRPL13Q9BYD1 178 aaKnown RBP17.63■□□□□ 0.41
CACNB3-218ENST00000550771 ZNF665Q9H7R5 613 aa17.63■□□□□ 0.41
CACNB3-218ENST00000550771 KAT8Q9H7Z6 458 aaKnown RBP17.63■□□□□ 0.41
CACNB3-218ENST00000550771 G6PC2Q9NQR9 355 aa17.63■□□□□ 0.41
CACNB3-218ENST00000550771 ANGPT2O15123 496 aa17.62■□□□□ 0.41
CACNB3-218ENST00000550771 COMPP49747 757 aaPredicted RBP17.62■□□□□ 0.41
CACNB3-218ENST00000550771 ZNF133P52736 654 aaPredicted RBP17.62■□□□□ 0.41
CACNB3-218ENST00000550771 ERVS71-1P61550 626 aa17.62■□□□□ 0.41
CACNB3-218ENST00000550771 RUNX1T1Q06455 604 aa17.62■□□□□ 0.41
CACNB3-218ENST00000550771 INTS11Q5TA45 600 aaKnown RBP17.62■□□□□ 0.41
CACNB3-218ENST00000550771 RETREG3Q86VR2 466 aa17.62■□□□□ 0.41
CACNB3-218ENST00000550771 NOXO1Q8NFA2 376 aa17.62■□□□□ 0.41
CACNB3-218ENST00000550771 TSPEARQ8WU66 669 aa17.62■□□□□ 0.41
CACNB3-218ENST00000550771 RASSF5Q8WWW0 418 aa17.62■□□□□ 0.41
CACNB3-218ENST00000550771 RAB39BQ96DA2 213 aa17.62■□□□□ 0.41
CACNB3-218ENST00000550771 ZNF347Q96SE7 839 aa17.62■□□□□ 0.41
CACNB3-218ENST00000550771 PRSS27Q9BQR3 290 aa17.62■□□□□ 0.41
CACNB3-218ENST00000550771 OR51B6Q9H340 312 aa17.62■□□□□ 0.41
CACNB3-218ENST00000550771 MEPEQ9NQ76 525 aaPredicted RBP17.62■□□□□ 0.41
CACNB3-218ENST00000550771 IGHV1-69-2A0A0G2JMI3 117 aa17.61■□□□□ 0.41
CACNB3-218ENST00000550771 A0A1W2PRG6 482 aa17.61■□□□□ 0.41
CACNB3-218ENST00000550771 BLOC1S5-TXNDC5H3BN57 136 aa17.61■□□□□ 0.41
CACNB3-218ENST00000550771 MT-ND5P03915 603 aa17.61■□□□□ 0.41
CACNB3-218ENST00000550771 MMP7P09237 267 aaPredicted RBP17.61■□□□□ 0.41
CACNB3-218ENST00000550771 RPL18Q07020 188 aaKnown RBP17.61■□□□□ 0.41
CACNB3-218ENST00000550771 C10orf128Q5T292 105 aa17.61■□□□□ 0.41
CACNB3-218ENST00000550771 C1orf229Q6ZS94 237 aaPredicted RBP17.61■□□□□ 0.41
CACNB3-218ENST00000550771 SLC26A7Q8TE54 656 aa17.61■□□□□ 0.41
CACNB3-218ENST00000550771 STX18Q9P2W9 335 aaKnown RBP17.61■□□□□ 0.41
CACNB3-218ENST00000550771 PCDHB10Q9UN67 800 aa17.61■□□□□ 0.41
CACNB3-218ENST00000550771 MCIDASD6RGH6 385 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 DEAF1O75398 565 aaPredicted RBP17.6■□□□□ 0.41
CACNB3-218ENST00000550771 TRMUO75648 421 aaKnown RBP17.6■□□□□ 0.41
CACNB3-218ENST00000550771 MPZL1O95297 269 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 IGF2P01344 180 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 IGHV3-13P01766 116 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 MT-ND1P03886 318 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 ACADSP16219 412 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 EPHA1P21709 976 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 DRD4P21917 467 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 APLNRP35414 380 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 DAP3P51398 398 aaKnown RBP17.6■□□□□ 0.41
CACNB3-218ENST00000550771 UGT2B15P54855 530 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 HILS1P60008 231 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 MVKQ03426 396 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 HSF2Q03933 536 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 NFYCQ13952 458 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 AVPI1Q5T686 147 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 USP51Q70EK9 711 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 SYT14Q8NB59 555 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 OR10A6Q8NH74 314 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 FAM216AQ8WUB2 273 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 ASB10Q8WXI3 467 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 KCNN2Q9H2S1 579 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 SIAEQ9HAT2 523 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 DECR2Q9NUI1 292 aa17.6■□□□□ 0.41
CACNB3-218ENST00000550771 A0A0G2JMP0 313 aa17.59■□□□□ 0.41
CACNB3-218ENST00000550771 A0A0X1KG70 313 aa17.59■□□□□ 0.41
CACNB3-218ENST00000550771 CLDN25C9JDP6 229 aa17.59■□□□□ 0.41
CACNB3-218ENST00000550771 J3QLI3 93 aa17.59■□□□□ 0.41
CACNB3-218ENST00000550771 F13BP05160 661 aa17.59■□□□□ 0.41
CACNB3-218ENST00000550771 FUT1P19526 365 aa17.59■□□□□ 0.41
CACNB3-218ENST00000550771 RBM34P42696 430 aaKnown RBP17.59■□□□□ 0.41
CACNB3-218ENST00000550771 ARFIP2P53365 341 aa17.59■□□□□ 0.41
CACNB3-218ENST00000550771 ACTG1P63261 375 aa17.59■□□□□ 0.41
CACNB3-218ENST00000550771 MRPS34P82930 218 aaKnown RBP17.59■□□□□ 0.41
CACNB3-218ENST00000550771 HFEQ30201 348 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms