RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 ACTC1P68032 377 aa17.78■□□□□ 0.44
CTDSP2-204ENST00000548823 ACTA1P68133 377 aa17.78■□□□□ 0.44
CTDSP2-204ENST00000548823 GPR50Q13585 617 aa17.78■□□□□ 0.44
CTDSP2-204ENST00000548823 MFSD13AQ14CX5 517 aa17.78■□□□□ 0.44
CTDSP2-204ENST00000548823 SGCBQ16585 318 aa17.78■□□□□ 0.44
CTDSP2-204ENST00000548823 KLHL12Q53G59 568 aa17.78■□□□□ 0.44
CTDSP2-204ENST00000548823 C1orf140Q5VVS0 124 aa17.78■□□□□ 0.44
CTDSP2-204ENST00000548823 TMPRSS11AQ6ZMR5 421 aa17.78■□□□□ 0.44
CTDSP2-204ENST00000548823 CIARTQ8N365 385 aaPredicted RBP17.78■□□□□ 0.44
CTDSP2-204ENST00000548823 POMGNT2Q8NAT1 580 aa17.78■□□□□ 0.44
CTDSP2-204ENST00000548823 OR51G2Q8NGK0 314 aa17.78■□□□□ 0.44
CTDSP2-204ENST00000548823 SNX18Q96RF0 628 aa17.78■□□□□ 0.44
CTDSP2-204ENST00000548823 METTL7AQ9H8H3 244 aa17.78■□□□□ 0.44
CTDSP2-204ENST00000548823 ZDHHC11Q9H8X9 412 aa17.78■□□□□ 0.44
CTDSP2-204ENST00000548823 CCDC59Q9P031 241 aaKnown RBP17.78■□□□□ 0.44
CTDSP2-204ENST00000548823 PPP4R1LQ9P1A2 415 aa17.78■□□□□ 0.44
CTDSP2-204ENST00000548823 MXRA5Q9NR99 2828 aa17.77■□□□□ 0.44
CTDSP2-204ENST00000548823 C17orf51A8MQB3 221 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 BLOC1S5-TXNDC5H3BN57 136 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 AKAP8O43823 692 aaKnown RBP17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 ITGA10O75578 1167 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 APOL3O95236 402 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 AHSA1O95433 338 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 CASP3P42574 277 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 RPS5P46782 204 aaKnown RBP17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 CTXN1P60606 82 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 RPL18Q07020 188 aaKnown RBP17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 GALEQ14376 348 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 OR2G6Q5TZ20 316 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 SHFQ7M4L6 423 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 MDGA2Q7Z553 956 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 LHFPL3Q86UP9 236 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 OR10G3Q8NGC4 313 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 OR5J2Q8NH18 312 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 OR4K13Q8NH42 304 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 LRRC46Q96FV0 321 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 MRGPRX4Q96LA9 322 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 CHCHD6Q9BRQ6 235 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 OR51V1Q9H2C8 321 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 PLGRKTQ9HBL7 147 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 ADGRL4Q9HBW9 690 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 ADAM18Q9Y3Q7 739 aa17.77■□□□□ 0.43
CTDSP2-204ENST00000548823 EML6Q6ZMW3 1958 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 C12orf71A8MTZ7 269 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 H7C1Q1 480 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 WDR1O75083 606 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 GPX5O75715 221 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 GAAP10253 952 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 SOX3P41225 446 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 CRYBB2P43320 205 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 DIO1P49895 249 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 RPS7P62081 194 aaKnown RBP17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 PPIAP62937 165 aaKnown RBP17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 ERVK-25P63136 954 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 DCTN2Q13561 401 aaKnown RBP17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 ZNF322Q6U7Q0 402 aaPredicted RBP17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 IGFN1Q86VF2 1251 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 CYB561A3Q8NBI2 242 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 SDR9C7Q8NEX9 313 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 UFD1Q92890 307 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 COQ7Q99807 217 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 ASPNQ9BXN1 380 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 POTEKPQ9BYX7 375 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 SLIRPQ9GZT3 109 aaKnown RBP17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 GALNT9Q9HCQ5 603 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 SSR3Q9UNL2 185 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 MOKQ9UQ07 419 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 SF3B6Q9Y3B4 125 aaKnown RBP17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 NOX1Q9Y5S8 564 aa17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 SPIN1Q9Y657 262 aaPredicted RBP17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 CHCHD2Q9Y6H1 151 aaPredicted RBP17.76■□□□□ 0.43
CTDSP2-204ENST00000548823 ACOT7O00154 380 aa17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 EPXP11678 715 aa17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 GALP22466 123 aa17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 FKBP2P26885 142 aaKnown RBP17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 SSR4P51571 173 aa17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 ZP4Q12836 540 aa17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 PON3Q15166 354 aa17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 ZNF829Q3KNS6 432 aaPredicted RBP17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 RIPPLY2Q5TAB7 128 aa17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 ADCK1Q86TW2 530 aa17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 EGFL6Q8IUX8 553 aa17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 FADS6Q8N9I5 356 aa17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 OR2M3Q8NG83 312 aa17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 MFSD8Q8NHS3 518 aa17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 GATAD2BQ8WXI9 593 aa17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 RNASE6Q93091 150 aaKnown RBP17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 CENPOQ9BU64 300 aa17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 NXF2Q9GZY0 626 aaKnown RBP17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 MMP27Q9H306 513 aa17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 MRPL39Q9NYK5 338 aaKnown RBP17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 MED11Q9P086 117 aa17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 CORINQ9Y5Q5 1042 aa17.75■□□□□ 0.43
CTDSP2-204ENST00000548823 ARHGAP21Q5T5U3 1957 aa17.74■□□□□ 0.43
CTDSP2-204ENST00000548823 LOC100506127A0A0U1RQW1 187 aa17.74■□□□□ 0.43
CTDSP2-204ENST00000548823 DAPL1A0PJW8 107 aa17.74■□□□□ 0.43
CTDSP2-204ENST00000548823 ZC3H12DA2A288 527 aaKnown RBP17.74■□□□□ 0.43
CTDSP2-204ENST00000548823 B4DXG7 233 aa17.74■□□□□ 0.43
CTDSP2-204ENST00000548823 FTCDNL1E5RQL4 147 aa17.74■□□□□ 0.43
CTDSP2-204ENST00000548823 GMFGO60234 142 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms