RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 CCKBRP32239 447 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 VIPR2P41587 438 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 MEOX2P50222 304 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 CAPZA1P52907 286 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 PSG6Q00889 435 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 DEFB115Q30KQ5 88 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 ITPRIPL2Q3MIP1 535 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 ZNF528Q3MIS6 628 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 DHRS7BQ6IAN0 325 aaPredicted RBP12.87□□□□□ -0.35
SRP54-202ENST00000546080 PRSS35Q8N3Z0 413 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 C10orf53Q8N6V4 93 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 EXD3Q8N9H8 876 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 INO80EQ8NBZ0 244 aaPredicted RBP12.87□□□□□ -0.35
SRP54-202ENST00000546080 OR1M1Q8NGA1 313 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 OR5T3Q8NGG3 340 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 THRSPQ92748 146 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 SLC22A18Q96BI1 424 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 RSPRY1Q96DX4 576 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 SEH1LQ96EE3 360 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 SRMSQ9H3Y6 488 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 FANCFQ9NPI8 374 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 SLC17A4Q9Y2C5 497 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 NUP210LQ5VU65 1888 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 SULT2B1O00204 365 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 FADS1O60427 444 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 ALOX12BO75342 701 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 CD14P08571 375 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 SDHAP31040 664 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 CTXN1P60606 82 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 GPR85P60893 370 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 HTRA3P83110 453 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 EGR3Q06889 387 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 TOMM20Q15388 145 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 HYAL4Q2M3T9 481 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 UNQ6126/PRO20091Q6UXV3 157 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 PGAP1Q75T13 922 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 RNF44Q7L0R7 432 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 FAM122BQ7Z309 247 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 BPIFB2Q8N4F0 458 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 THAP6Q8TBB0 222 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 HERVK_113Q902F9 699 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 CTHRC1Q96CG8 243 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 DCBLD2Q96PD2 775 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 LMF1Q96S06 567 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 GAL3ST1Q99999 423 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 WDR76Q9H967 626 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 MKL2Q9ULH7 1088 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 FARSAQ9Y285 508 aaKnown RBP12.87□□□□□ -0.35
SRP54-202ENST00000546080 PLEKHA6Q9Y2H5 1048 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 SCN2AQ99250 2005 aa12.87□□□□□ -0.35
SRP54-202ENST00000546080 EFCAB7A8K855 629 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 FAM25EA8MYX2 175 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 H7C1C5 153 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 DCTN6O00399 190 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 CYR61O00622 381 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 OR10H2O60403 315 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 CSTAP01040 98 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 LIPCP11150 499 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 PBX2P40425 430 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 RPS27P42677 84 aaKnown RBP12.86□□□□□ -0.35
SRP54-202ENST00000546080 KIR3DL2P43630 455 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 PRKXP51817 358 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 LCN6P62502 163 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 DMWDQ09019 674 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 INPP5JQ15735 1006 aaPredicted RBP12.86□□□□□ -0.35
SRP54-202ENST00000546080 GAB4Q2WGN9 574 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 ALG10Q5BKT4 473 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 DPY19L4Q7Z388 723 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 GTPBP8Q8N3Z3 284 aaPredicted RBP12.86□□□□□ -0.35
SRP54-202ENST00000546080 C4orf45Q96LM5 186 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 NKX3-1Q99801 234 aaPredicted RBP12.86□□□□□ -0.35
SRP54-202ENST00000546080 SERGEFQ9UGK8 458 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 MRPS23Q9Y3D9 190 aaKnown RBP12.86□□□□□ -0.35
SRP54-202ENST00000546080 ZNF736B4DX44 427 aaPredicted RBP12.86□□□□□ -0.35
SRP54-202ENST00000546080 AKR7A3O95154 331 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 SNAPINO95295 136 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 IFI6P09912 130 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 SGCGQ13326 291 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 ENPP2Q13822 863 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 CST6Q15828 149 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 ZNF141Q15928 474 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 WDR38Q5JTN6 314 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 PDE4DIPQ5VU43 2346 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 FCRL6Q6DN72 434 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 H3F3CQ6NXT2 135 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 TMEM71Q6P5X7 295 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 DGAT2L6Q6ZPD8 337 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 PLPP7Q8NBV4 271 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 PAQR8Q8TEZ7 354 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 WNT2BQ93097 391 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 ARL11Q969Q4 196 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 C3orf49Q96BT1 292 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 NOTCH4Q99466 2003 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 MNTQ99583 582 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 LMF2Q9BU23 707 aaKnown RBP12.86□□□□□ -0.35
SRP54-202ENST00000546080 EDEM2Q9BV94 578 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 MBD2Q9UBB5 411 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 PILRAQ9UKJ1 303 aa12.86□□□□□ -0.35
SRP54-202ENST00000546080 A0A1W2PP55 124 aa12.85□□□□□ -0.35
SRP54-202ENST00000546080 CSN2P05814 226 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms