RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 SPICQ8N5J4 248 aa12.85□□□□□ -0.35
CLSTN3-216ENST00000545663 VPS37AQ8NEZ2 397 aa12.85□□□□□ -0.35
CLSTN3-216ENST00000545663 DACT3Q96B18 629 aaPredicted RBP12.85□□□□□ -0.35
CLSTN3-216ENST00000545663 DPY30Q9C005 99 aa12.85□□□□□ -0.35
CLSTN3-216ENST00000545663 WDR55Q9H6Y2 383 aaPredicted RBP12.85□□□□□ -0.35
CLSTN3-216ENST00000545663 B3GAT1Q9P2W7 334 aa12.85□□□□□ -0.35
CLSTN3-216ENST00000545663 STAB2Q8WWQ8 2551 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 IGHV2-70DA0A0C4DH43 119 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 ZSCAN5BA6NJL1 495 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 SERPINA5P05154 406 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 PNMTP11086 282 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 G6PDP11413 515 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 ZNF43P17038 809 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 DRD4P21917 467 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 MMP15P51511 669 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 MAP2K6P52564 334 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 MFSD13AQ14CX5 517 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 LSM12Q3MHD2 195 aaKnown RBP12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 PDCD4Q53EL6 469 aaKnown RBP12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 FAM209AQ5JX71 171 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 C1orf140Q5VVS0 124 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 C16orf62Q7Z3J2 963 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 MAVSQ7Z434 540 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 MIER2Q8N344 545 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 PIK3C3Q8NEB9 887 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 TBC1D15Q8TC07 691 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 RAB40AQ8WXH6 277 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 TESCQ96BS2 214 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 SLC25A36Q96CQ1 311 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 C1orf50Q9BV19 199 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 SDR39U1Q9NRG7 319 aaPredicted RBP12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 AIG1Q9NVV5 245 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 ZIM2Q9NZV7 527 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 IL20RAQ9UHF4 553 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 ATP6V1HQ9UI12 483 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 WDR45Q9Y484 360 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 PCDHGB5Q9Y5G0 923 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 PCLOQ9Y6V0 5065 aa12.84□□□□□ -0.35
CLSTN3-216ENST00000545663 IGHV3-13P01766 116 aa12.83□□□□□ -0.36
CLSTN3-216ENST00000545663 MT-ND5P03915 603 aa12.83□□□□□ -0.36
CLSTN3-216ENST00000545663 WNT2P09544 360 aa12.83□□□□□ -0.36
CLSTN3-216ENST00000545663 FGF12P61328 243 aa12.83□□□□□ -0.36
CLSTN3-216ENST00000545663 CD69Q07108 199 aa12.83□□□□□ -0.36
CLSTN3-216ENST00000545663 FUT5Q11128 374 aa12.83□□□□□ -0.36
CLSTN3-216ENST00000545663 CAMK2DQ13557 499 aa12.83□□□□□ -0.36
CLSTN3-216ENST00000545663 HERPUD1Q15011 391 aa12.83□□□□□ -0.36
CLSTN3-216ENST00000545663 TMEM155Q4W5P6 130 aa12.83□□□□□ -0.36
CLSTN3-216ENST00000545663 GPR157Q5UAW9 335 aa12.83□□□□□ -0.36
CLSTN3-216ENST00000545663 FRRS1Q6ZNA5 592 aa12.83□□□□□ -0.36
CLSTN3-216ENST00000545663 Q6ZTK2 550 aa12.83□□□□□ -0.36
CLSTN3-216ENST00000545663 C6orf120Q7Z4R8 191 aa12.83□□□□□ -0.36
CLSTN3-216ENST00000545663 SKA3Q8IX90 412 aa12.83□□□□□ -0.36
CLSTN3-216ENST00000545663 SLC30A7Q8NEW0 376 aa12.83□□□□□ -0.36
CLSTN3-216ENST00000545663 SFXN5Q8TD22 340 aa12.83□□□□□ -0.36
CLSTN3-216ENST00000545663 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.83□□□□□ -0.36
CLSTN3-216ENST00000545663 SIGLEC9Q9Y336 463 aa12.83□□□□□ -0.36
CLSTN3-216ENST00000545663 WI2-2373I1.2A0A1W2PRP0 233 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 SLC22A3O75751 556 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 AK1P00568 194 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 IL6P05231 212 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 TFPTP0C1Z6 253 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 OR12D1P0DN82 309 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 SOAT1P35610 550 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 MPV17P39210 176 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 IER3P46695 156 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 UCP2P55851 309 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 C1DQ13901 141 aaKnown RBP12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 DOC2BQ14184 412 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 PTGR1Q14914 329 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 LARS2Q15031 903 aaKnown RBP12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 SPATA46Q5T0L3 261 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 ANXA8L1Q5VT79 327 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 ZNF774Q6NX45 483 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 ZNF627Q7L945 461 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 RIMKLAQ8IXN7 391 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 C20orf196Q8IYI0 205 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 OR8J2Q8NGG1 315 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 XAGE5Q8WWM1 108 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 COQ8BQ96D53 544 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 OR52B2Q96RD2 323 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 EMC6Q9BV81 110 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 TMEM120AQ9BXJ8 343 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 EGLN1Q9GZT9 426 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 OR51I1Q9H343 314 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 FN3KRPQ9HA64 309 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 TMEM106BQ9NUM4 274 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 GIMAP2Q9UG22 337 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 FOXJ3Q9UPW0 622 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 POFUT2Q9Y2G5 429 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 GPR45Q9Y5Y3 372 aa12.82□□□□□ -0.36
CLSTN3-216ENST00000545663 DNAH7Q8WXX0 4024 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 KIR2DS1A0A191URI9 304 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 PRAMEF27A3QJZ7 478 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 DUXAA6NLW8 204 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 CEACAM18A8MTB9 384 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 A8MVM7 634 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 FTCDNL1E5RQL4 147 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 E9PBE3 544 aa12.81□□□□□ -0.36
CLSTN3-216ENST00000545663 TNFRSF13BO14836 293 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms