RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 MT-ATP6P00846 226 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 KNG1P01042 644 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 NGFP01138 241 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 SERPINE1P05121 402 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 ZNF133P52736 654 aaPredicted RBP12.39□□□□□ -0.43
RTN3-214ENST00000545432 KRTAP10-3P60369 221 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 ABCE1P61221 599 aaKnown RBP12.39□□□□□ -0.43
RTN3-214ENST00000545432 RELBQ01201 579 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 ZNF718Q3SXZ3 478 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 OLFML2AQ68BL7 652 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 TMEM53Q6P2H8 277 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 C1orf174Q8IYL3 243 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 KIRREL3Q8IZU9 778 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 KIR3DL3Q8N743 410 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 ZNF283Q8N7M2 679 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 OR52E2Q8NGJ4 325 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 SLC25A44Q96H78 314 aaPredicted RBP12.39□□□□□ -0.43
RTN3-214ENST00000545432 C16orf45Q96MC5 204 aaPredicted RBP12.39□□□□□ -0.43
RTN3-214ENST00000545432 DIRC2Q96SL1 478 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 MRI1Q9BV20 369 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 EGLN1Q9GZT9 426 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 MS4A7Q9GZW8 240 aaPredicted RBP12.39□□□□□ -0.43
RTN3-214ENST00000545432 LRMDAQ9H2I8 198 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 A4GALTQ9NPC4 353 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 CYSLTR2Q9NS75 346 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 DCAF16Q9NXF7 216 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 UBAP1Q9NZ09 502 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 CGGBP1Q9UFW8 167 aaPredicted RBP12.39□□□□□ -0.43
RTN3-214ENST00000545432 IL20RAQ9UHF4 553 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 ZDHHC8Q9ULC8 765 aa12.39□□□□□ -0.43
RTN3-214ENST00000545432 SOX21Q9Y651 276 aaPredicted RBP12.39□□□□□ -0.43
RTN3-214ENST00000545432 H3BSA7 217 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 TIMM23O14925 209 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 SPRY3O43610 288 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 TPST2O60704 377 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 FARS2O95363 451 aaKnown RBP12.38□□□□□ -0.43
RTN3-214ENST00000545432 IL6P05231 212 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 IGHV4-38-2P0DP08 117 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 DRD4P21917 467 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 OMGP23515 440 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 MPV17P39210 176 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 WNT5AP41221 380 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 BIDP55957 195 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 SEC61A1P61619 476 aaKnown RBP12.38□□□□□ -0.43
RTN3-214ENST00000545432 SLC36A2Q495M3 483 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 FAM205BPQ63HN1 556 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 SPATC1Q76KD6 591 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 NUDCD3Q8IVD9 361 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 ZNF101Q8IZC7 436 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 MIER2Q8N344 545 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 SPICQ8N5J4 248 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 OR4K5Q8NGD3 323 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 OR1J1Q8NGS3 322 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 OR5J2Q8NH18 312 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 OR4F5Q8NH21 305 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 BBS10Q8TAM1 723 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 VPS33AQ96AX1 596 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 POM121L2Q96KW2 1035 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 SEPHS2Q99611 448 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 RBM4BQ9BQ04 359 aaKnown RBP12.38□□□□□ -0.43
RTN3-214ENST00000545432 RHOXF2Q9BQY4 288 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 NUF2Q9BZD4 464 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 TAS2R5Q9NYW4 299 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 EGFL7Q9UHF1 273 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 TRIM33Q9UPN9 1127 aa12.38□□□□□ -0.43
RTN3-214ENST00000545432 IQCMA0A1B0GVH7 501 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 CLPSL1A2RUU4 121 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 ISPDA4D126 451 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 FAM181BA6NEQ2 426 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 LRRN3E7EW58 273 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 NUDT7P0C024 238 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 SBK2P0C263 348 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 PGA4P0DJD7 388 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 PGA3P0DJD8 388 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 NME5P56597 212 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 PLP2Q04941 152 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 CDK5R2Q13319 367 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 RGNQ15493 299 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 SWT1Q5T5J6 900 aaKnown RBP12.37□□□□□ -0.43
RTN3-214ENST00000545432 C17orf107Q6ZR85 190 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 MSANTD1Q6ZTZ1 278 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 SLC35D2Q76EJ3 337 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 SLC16A14Q7RTX9 510 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 PARP8Q8N3A8 854 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 KLF14Q8TD94 323 aaPredicted RBP12.37□□□□□ -0.43
RTN3-214ENST00000545432 IPCEF1Q8WWN9 437 aaPredicted RBP12.37□□□□□ -0.43
RTN3-214ENST00000545432 ZNF566Q969W8 418 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 SAMD8Q96LT4 415 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 SIGLEC11Q96RL6 698 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 MRPL13Q9BYD1 178 aaKnown RBP12.37□□□□□ -0.43
RTN3-214ENST00000545432 OR51B6Q9H340 312 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 RNF121Q9H920 327 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 TMEM106BQ9NUM4 274 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 C1RLQ9NZP8 487 aa12.37□□□□□ -0.43
RTN3-214ENST00000545432 TANC2Q9HCD6 1990 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 TLDC2A0PJX2 215 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 TMEM247A6NEH6 219 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 SRRM5B3KS81 715 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 SDHDO14521 159 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 BIRC5O15392 142 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms