RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ARHGAP9Q9BRR9 750 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 LHX6Q9UPM6 363 aa27.05■■□□□ 1.92
CCM2-219ENST00000544363 TAF4O00268 1085 aa27.04■■□□□ 1.92
CCM2-219ENST00000544363 CD36P16671 472 aa27.04■■□□□ 1.92
CCM2-219ENST00000544363 TMBIM6P55061 237 aa27.04■■□□□ 1.92
CCM2-219ENST00000544363 CHMP1BQ7LBR1 199 aa27.04■■□□□ 1.92
CCM2-219ENST00000544363 ANKRD13BQ86YJ7 626 aa27.04■■□□□ 1.92
CCM2-219ENST00000544363 SPRYD4Q8WW59 207 aaPredicted RBP27.04■■□□□ 1.92
CCM2-219ENST00000544363 FOXN4Q96NZ1 517 aa27.04■■□□□ 1.92
CCM2-219ENST00000544363 YIPF3Q9GZM5 350 aa27.04■■□□□ 1.92
CCM2-219ENST00000544363 WDR76Q9H967 626 aa27.04■■□□□ 1.92
CCM2-219ENST00000544363 ISYNA1Q9NPH2 558 aa27.04■■□□□ 1.92
CCM2-219ENST00000544363 COPS3Q9UNS2 423 aa27.04■■□□□ 1.92
CCM2-219ENST00000544363 ZNF701M0R085 212 aaPredicted RBP27.03■■□□□ 1.92
CCM2-219ENST00000544363 ZNF432O94892 652 aa27.03■■□□□ 1.92
CCM2-219ENST00000544363 NR2C1P13056 603 aa27.03■■□□□ 1.92
CCM2-219ENST00000544363 RGS6P49758 472 aa27.03■■□□□ 1.92
CCM2-219ENST00000544363 INAQ16352 499 aa27.03■■□□□ 1.92
CCM2-219ENST00000544363 TSTQ16762 297 aaKnown RBP27.03■■□□□ 1.92
CCM2-219ENST00000544363 PLEKHN1Q494U1 663 aaPredicted RBP27.03■■□□□ 1.92
CCM2-219ENST00000544363 SSX6Q7RTT6 188 aa27.03■■□□□ 1.92
CCM2-219ENST00000544363 TMEM123Q8N131 208 aa27.03■■□□□ 1.92
CCM2-219ENST00000544363 RNF128Q8TEB7 428 aa27.03■■□□□ 1.92
CCM2-219ENST00000544363 ABHD3Q8WU67 409 aa27.03■■□□□ 1.92
CCM2-219ENST00000544363 PLSCR2Q9NRY7 297 aa27.03■■□□□ 1.92
CCM2-219ENST00000544363 MRPL22Q9NWU5 206 aaKnown RBP27.03■■□□□ 1.92
CCM2-219ENST00000544363 CAMK2AQ9UQM7 478 aa27.03■■□□□ 1.92
CCM2-219ENST00000544363 RCE1Q9Y256 329 aa27.03■■□□□ 1.92
CCM2-219ENST00000544363 AQP7O14520 342 aa27.02■■□□□ 1.92
CCM2-219ENST00000544363 HSF2Q03933 536 aa27.02■■□□□ 1.92
CCM2-219ENST00000544363 SLC25A47Q6Q0C1 308 aa27.02■■□□□ 1.92
CCM2-219ENST00000544363 CDC20BQ86Y33 519 aa27.02■■□□□ 1.92
CCM2-219ENST00000544363 RFLNBQ8N5W9 214 aa27.02■■□□□ 1.92
CCM2-219ENST00000544363 OR6N2Q8NGY6 317 aa27.02■■□□□ 1.92
CCM2-219ENST00000544363 NSMAFQ92636 917 aa27.02■■□□□ 1.92
CCM2-219ENST00000544363 TMEM54Q969K7 222 aa27.02■■□□□ 1.92
CCM2-219ENST00000544363 MCHR2Q969V1 340 aa27.02■■□□□ 1.92
CCM2-219ENST00000544363 MNTQ99583 582 aa27.02■■□□□ 1.92
CCM2-219ENST00000544363 ISG20L2Q9H9L3 353 aaKnown RBP27.02■■□□□ 1.92
CCM2-219ENST00000544363 GLTPQ9NZD2 209 aa27.02■■□□□ 1.92
CCM2-219ENST00000544363 ENPP5Q9UJA9 477 aa27.02■■□□□ 1.92
CCM2-219ENST00000544363 ING1Q9UK53 422 aaPredicted RBP27.02■■□□□ 1.92
CCM2-219ENST00000544363 ZNF670-ZNF695F2Z2N8 137 aa27.01■■□□□ 1.92
CCM2-219ENST00000544363 CSNK1A1P48729 337 aa27.01■■□□□ 1.92
CCM2-219ENST00000544363 UNQ6494/PRO21346Q6UXR6 183 aa27.01■■□□□ 1.92
CCM2-219ENST00000544363 PNPLA2Q96AD5 504 aa27.01■■□□□ 1.92
CCM2-219ENST00000544363 ZNF775Q96BV0 537 aaPredicted RBP27.01■■□□□ 1.92
CCM2-219ENST00000544363 DOK1Q99704 481 aa27.01■■□□□ 1.92
CCM2-219ENST00000544363 IGKV3D-15A0A087WSY6 115 aa27.01■■□□□ 1.91
CCM2-219ENST00000544363 CCRL2O00421 344 aa27.01■■□□□ 1.91
CCM2-219ENST00000544363 WISP2O76076 250 aa27.01■■□□□ 1.91
CCM2-219ENST00000544363 SELENOPP49908 381 aa27.01■■□□□ 1.91
CCM2-219ENST00000544363 ACSM1Q08AH1 577 aa27.01■■□□□ 1.91
CCM2-219ENST00000544363 P2RY8Q86VZ1 359 aa27.01■■□□□ 1.91
CCM2-219ENST00000544363 GLB1L2Q8IW92 636 aa27.01■■□□□ 1.91
CCM2-219ENST00000544363 SLC26A10Q8NG04 563 aa27.01■■□□□ 1.91
CCM2-219ENST00000544363 OR6N1Q8NGY5 312 aa27.01■■□□□ 1.91
CCM2-219ENST00000544363 FNDC9Q8TBE3 224 aa27.01■■□□□ 1.91
CCM2-219ENST00000544363 RAB2BQ8WUD1 216 aa27.01■■□□□ 1.91
CCM2-219ENST00000544363 INTS12Q96CB8 462 aaKnown RBP27.01■■□□□ 1.91
CCM2-219ENST00000544363 PRRG4Q9BZD6 226 aa27.01■■□□□ 1.91
CCM2-219ENST00000544363 PRDM14Q9GZV8 571 aa27.01■■□□□ 1.91
CCM2-219ENST00000544363 KLHL9Q9P2J3 617 aa27.01■■□□□ 1.91
CCM2-219ENST00000544363 PTPRQQ9UMZ3 2332 aa27■■□□□ 1.91
CCM2-219ENST00000544363 MGAQ8IWI9 3026 aa27■■□□□ 1.91
CCM2-219ENST00000544363 NOL3O60936 208 aaKnown RBP27■■□□□ 1.91
CCM2-219ENST00000544363 QDPRP09417 244 aa27■■□□□ 1.91
CCM2-219ENST00000544363 ACTA2P62736 377 aa27■■□□□ 1.91
CCM2-219ENST00000544363 ACTG2P63267 376 aa27■■□□□ 1.91
CCM2-219ENST00000544363 CNPY1Q3B7I2 92 aa27■■□□□ 1.91
CCM2-219ENST00000544363 LRFN4Q6PJG9 635 aa27■■□□□ 1.91
CCM2-219ENST00000544363 SLC16A12Q6ZSM3 486 aa27■■□□□ 1.91
CCM2-219ENST00000544363 DPY19L4Q7Z388 723 aa27■■□□□ 1.91
CCM2-219ENST00000544363 MRPL48Q96GC5 212 aaKnown RBP27■■□□□ 1.91
CCM2-219ENST00000544363 ZNF593O00488 134 aaPredicted RBP26.99■■□□□ 1.91
CCM2-219ENST00000544363 MT-ND5P03915 603 aa26.99■■□□□ 1.91
CCM2-219ENST00000544363 GAAP10253 952 aa26.99■■□□□ 1.91
CCM2-219ENST00000544363 SSX1Q16384 188 aa26.99■■□□□ 1.91
CCM2-219ENST00000544363 CDONQ4KMG0 1287 aa26.99■■□□□ 1.91
CCM2-219ENST00000544363 C12orf43Q96C57 262 aaKnown RBP26.99■■□□□ 1.91
CCM2-219ENST00000544363 C4orf36Q96KX1 117 aa26.99■■□□□ 1.91
CCM2-219ENST00000544363 MYCBPQ99417 103 aaPredicted RBP26.99■■□□□ 1.91
CCM2-219ENST00000544363 BABAM2Q9NXR7 383 aa26.99■■□□□ 1.91
CCM2-219ENST00000544363 FOXD3Q9UJU5 478 aaPredicted RBP26.99■■□□□ 1.91
CCM2-219ENST00000544363 TMEM14AQ9Y6G1 99 aa26.99■■□□□ 1.91
CCM2-219ENST00000544363 GPR171O14626 319 aa26.98■■□□□ 1.91
CCM2-219ENST00000544363 AQP8O94778 261 aa26.98■■□□□ 1.91
CCM2-219ENST00000544363 MPZL1O95297 269 aa26.98■■□□□ 1.91
CCM2-219ENST00000544363 LALBAP00709 142 aa26.98■■□□□ 1.91
CCM2-219ENST00000544363 CPEP16870 476 aa26.98■■□□□ 1.91
CCM2-219ENST00000544363 NTF4P34130 210 aa26.98■■□□□ 1.91
CCM2-219ENST00000544363 ENTPD1P49961 510 aa26.98■■□□□ 1.91
CCM2-219ENST00000544363 ZNF133P52736 654 aaPredicted RBP26.98■■□□□ 1.91
CCM2-219ENST00000544363 OR12D2P58182 307 aa26.98■■□□□ 1.91
CCM2-219ENST00000544363 PLXDC2Q6UX71 529 aa26.98■■□□□ 1.91
CCM2-219ENST00000544363 AAED1Q7RTV5 226 aa26.98■■□□□ 1.91
CCM2-219ENST00000544363 KLBQ86Z14 1044 aa26.98■■□□□ 1.91
CCM2-219ENST00000544363 C20orf196Q8IYI0 205 aa26.98■■□□□ 1.91
CCM2-219ENST00000544363 SYS1Q8N2H4 156 aa26.98■■□□□ 1.91
CCM2-219ENST00000544363 SNX33Q8WV41 574 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms