RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 TYMSP04818 313 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 GLRBP48167 497 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 WNT7BP56706 349 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 ISL1P61371 349 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 LGALSLQ3ZCW2 172 aaPredicted RBP8.11□□□□□ -1.11
VPS13D-212ENST00000543766 CLEC12AQ5QGZ9 265 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 DNERQ8NFT8 737 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 FAM162AQ96A26 154 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 ANKRD9Q96BM1 317 aaPredicted RBP8.11□□□□□ -1.11
VPS13D-212ENST00000543766 ALG14Q96F25 216 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 TRIB3Q96RU7 358 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 C11orf54Q9H0W9 315 aaPredicted RBP8.11□□□□□ -1.11
VPS13D-212ENST00000543766 LYRM4Q9HD34 91 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.11□□□□□ -1.11
VPS13D-212ENST00000543766 TMEM45AQ9NWC5 275 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 DDIT4Q9NX09 232 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 PEF1Q9UBV8 284 aaKnown RBP8.11□□□□□ -1.11
VPS13D-212ENST00000543766 PPIAL4AQ9Y536 164 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 EVPLQ92817 2033 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 SLC1A7O00341 560 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 CASKO14936 926 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 FZD7O75084 574 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 ALDOBP05062 364 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 C1GALT1C1LP0DN25 315 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 ARSBP15848 533 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 FLT3LGP49771 235 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 SRSF6Q13247 344 aaKnown RBP8.11□□□□□ -1.11
VPS13D-212ENST00000543766 ACSM3Q53FZ2 586 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 FBLN7Q53RD9 439 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 SOHLH1Q5JUK2 328 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 CDC42EP5Q6NZY7 148 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 DCBLD1Q8N8Z6 715 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 OR10AD1Q8NGE0 317 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 NDRG1Q92597 394 aaKnown RBP8.11□□□□□ -1.11
VPS13D-212ENST00000543766 WBP1Q96G27 269 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 LCORQ96JN0 433 aaPredicted RBP8.11□□□□□ -1.11
VPS13D-212ENST00000543766 SLC30A3Q99726 388 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 OR2J1Q9GZK6 312 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 WDR54Q9H977 334 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 ZBTB20Q9HC78 741 aaPredicted RBP8.11□□□□□ -1.11
VPS13D-212ENST00000543766 RNF181Q9P0P0 153 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 CRLS1Q9UJA2 301 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 FCF1Q9Y324 198 aaKnown RBP8.11□□□□□ -1.11
VPS13D-212ENST00000543766 LAMA3Q16787 3333 aa8.11□□□□□ -1.11
VPS13D-212ENST00000543766 IGLV3-22A0A075B6J6 115 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 OR5H15A6NDH6 313 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 OR5H1A6NKK0 313 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 FXYD1O00168 92 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 IMPA2O14732 288 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 ALOX12BO75342 701 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 ACTL6AO96019 429 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 ZNF28P17035 718 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 IL2RGP31785 369 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 PTH2RP49190 550 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 KCNQ1P51787 676 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 C3orf36Q3SXR2 165 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 ARL9Q6T311 187 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 OR52B4Q8NGK2 314 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 OR4P4Q8NGL7 312 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 MMABQ96EY8 250 aaPredicted RBP8.1□□□□□ -1.11
VPS13D-212ENST00000543766 CLCC1Q96S66 551 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 MRPL13Q9BYD1 178 aaKnown RBP8.1□□□□□ -1.11
VPS13D-212ENST00000543766 DPAGT1Q9H3H5 408 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 TMEM231Q9H6L2 316 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 AUNIPQ9H7T9 357 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 NLE1Q9NVX2 485 aaPredicted RBP8.1□□□□□ -1.11
VPS13D-212ENST00000543766 OR51B4Q9Y5P0 310 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 MEIKINA0A087WXM9 373 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 A0A0D9SG52 128 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 ZNF785A8K8V0 405 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 SEMA7AO75326 666 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 MOSPD3O75425 235 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 RHOCP08134 193 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 HTR2AP28223 471 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 UQCRFS1P47985 274 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 ATP4BP51164 291 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 PPP1R8Q12972 351 aaKnown RBP8.1□□□□□ -1.11
VPS13D-212ENST00000543766 TPBGQ13641 420 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 CCL15Q16663 113 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 IZUMO1Q8IYV9 350 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 LRRC75AQ8NAA5 344 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 LHX4Q969G2 390 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 AMBRA1Q9C0C7 1298 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 DUSP21Q9H596 190 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 WFDC1Q9HC57 220 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 SLC52A3Q9NQ40 469 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 FLRT1Q9NZU1 646 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 DAPP1Q9UN19 280 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 SLC35A3Q9Y2D2 325 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 LSM5Q9Y4Y9 91 aaKnown RBP8.1□□□□□ -1.11
VPS13D-212ENST00000543766 MSCO60682 206 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 S1PR2O95136 353 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 BCHEP06276 602 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 CMPK1P30085 196 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 GIPRP48546 466 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 HYAL1Q12794 435 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 OLIG2Q13516 323 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 ARL13AQ5H913 290 aaPredicted RBP8.1□□□□□ -1.11
VPS13D-212ENST00000543766 TMEM240Q5SV17 173 aa8.1□□□□□ -1.11
VPS13D-212ENST00000543766 TOMM20LQ6UXN7 152 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms