RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 HIPK1Q86Z02 1210 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 NRMQ8IXM6 262 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 RBM15BQ8NDT2 890 aaKnown RBP11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 NOXO1Q8NFA2 376 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 NABP1Q96AH0 204 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 HSH2DQ96JZ2 352 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 RAB1BQ9H0U4 201 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 YAE1D1Q9NRH1 226 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 MYEF2Q9P2K5 600 aaKnown RBP11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 FBXO9Q9UK97 447 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 FBXL3Q9UKT7 428 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 CMAHPQ9Y471 501 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 FKBP7Q9Y680 259 aa11.28□□□□□ -0.6
TNFRSF1A-215ENST00000543359 A0A087WUU8 490 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 A8MV72 311 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 VSTM5A8MXK1 200 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SLC2A10O95528 541 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 STAMBPO95630 424 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ZNF682O95780 498 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SERPINA1P01009 418 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 IGHMP01871 453 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ADRA2AP08913 450 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 NCK1P16333 377 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ZNF26P17031 533 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 GIFP27352 417 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 PRDX6P30041 224 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 FMODQ06828 376 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 TRAM2Q15035 370 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 IFI44LQ53G44 452 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ALG10Q5BKT4 473 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 DPPA2Q7Z7J5 298 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 RNF113BQ8IZP6 322 aaKnown RBP11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 CLDN22Q8N7P3 220 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 FAM156AQ8NDB6 213 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 CPEB3Q8NE35 698 aaKnown RBP11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ZNF519Q8TB69 540 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 GEMIN6Q8WXD5 167 aaKnown RBP11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ACOT11Q8WXI4 607 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 MDFIQ99750 246 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SIAEQ9HAT2 523 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SMURF2Q9HAU4 748 aa11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 MYOZ1Q9NP98 299 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF1A-215ENST00000543359 TRAV27A0A087WT01 109 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SH3PXD2BA1X283 911 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 MCIDASD6RGH6 385 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 CDC42EP2O14613 210 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 MGRN1O60291 552 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 CCL2P13500 99 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 DAOP14920 347 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 CDAP32320 146 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 LSP1P33241 339 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 RPL27P61353 136 aaKnown RBP11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 MRPS34P82930 218 aaKnown RBP11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 TAF11Q15544 211 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 IQCCQ4KMZ1 466 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 TMPRSS11FQ6ZWK6 438 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 MBOAT2Q6ZWT7 520 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SLC16A14Q7RTX9 510 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 HDDC2Q7Z4H3 204 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SLC30A7Q8NEW0 376 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 OR51A7Q8NH64 312 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SLC7A13Q8TCU3 470 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 NEU4Q8WWR8 484 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 CMTM5Q96DZ9 223 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 C7orf34Q96L11 122 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 TSPAN32Q96QS1 320 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 KCTD14Q9BQ13 255 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 PIMREGQ9BSJ6 248 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ALG12Q9BV10 488 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 FNDC11Q9BVV2 318 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 NMNAT1Q9HAN9 279 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 NDUFAF4Q9P032 175 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SLC7A8Q9UHI5 535 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ZNF346Q9UL40 294 aaKnown RBP11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SPEF1Q9Y4P9 236 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ENPP4Q9Y6X5 453 aa11.26□□□□□ -0.61
TNFRSF1A-215ENST00000543359 NDUFAB1O14561 156 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 GSTA4O15217 222 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SYNGR3O43761 229 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 LILRA1O75019 489 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ENTPD5O75356 428 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 FARS2O95363 451 aaKnown RBP11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SNAP29O95721 258 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SLC9A3P48764 834 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ZNF84P51523 738 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 GYS2P54840 703 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 CTXN1P60606 82 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 RIN1Q13671 783 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ANKDD1AQ495B1 522 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 SLC36A2Q495M3 483 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 THEM4Q5T1C6 240 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 FAM27BQ5VT28 67 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 CYB5R2Q6BCY4 276 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 TMEM53Q6P2H8 277 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 FOXL2NBQ6ZUU3 175 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 IGFN1Q86VF2 1251 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 ZNF786Q8N393 782 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 LRRC18Q8N456 261 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 FAM86B1Q8N7N1 296 aa11.25□□□□□ -0.61
TNFRSF1A-215ENST00000543359 OR13C2Q8NGS9 318 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms