RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 MSRB3Q8IXL7 192 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 OR1J1Q8NGS3 322 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 CCL17Q92583 94 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 TAF15Q92804 592 aaKnown RBP eCLIP15.08■□□□□ 0
CLSTN3-214ENST00000542663 ZNF566Q969W8 418 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 ELMOD3Q96FG2 381 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 SLC25A44Q96H78 314 aaPredicted RBP15.08■□□□□ 0
CLSTN3-214ENST00000542663 MMP26Q9NRE1 261 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 SELENONQ9NZV5 590 aa15.08■□□□□ 0
CLSTN3-214ENST00000542663 RGS16O15492 202 aaPredicted RBP15.07■□□□□ 0
CLSTN3-214ENST00000542663 SNNO75324 88 aaPredicted RBP15.07■□□□□ 0
CLSTN3-214ENST00000542663 FARS2O95363 451 aaKnown RBP15.07■□□□□ 0
CLSTN3-214ENST00000542663 MMP7P09237 267 aaPredicted RBP15.07■□□□□ 0
CLSTN3-214ENST00000542663 QDPRP09417 244 aa15.07■□□□□ 0
CLSTN3-214ENST00000542663 DRD4P21917 467 aa15.07■□□□□ 0
CLSTN3-214ENST00000542663 MPV17P39210 176 aa15.07■□□□□ 0
CLSTN3-214ENST00000542663 CDK6Q00534 326 aa15.07■□□□□ 0
CLSTN3-214ENST00000542663 SLC36A2Q495M3 483 aa15.07■□□□□ 0
CLSTN3-214ENST00000542663 MIDNQ504T8 468 aa15.07■□□□□ 0
CLSTN3-214ENST00000542663 SWT1Q5T5J6 900 aaKnown RBP15.07■□□□□ 0
CLSTN3-214ENST00000542663 REEP3Q6NUK4 255 aa15.07■□□□□ 0
CLSTN3-214ENST00000542663 SLC16A14Q7RTX9 510 aa15.07■□□□□ 0
CLSTN3-214ENST00000542663 MAVSQ7Z434 540 aa15.07■□□□□ 0
CLSTN3-214ENST00000542663 DPPA2Q7Z7J5 298 aa15.07■□□□□ 0
CLSTN3-214ENST00000542663 CPEB3Q8NE35 698 aaKnown RBP15.07■□□□□ 0
CLSTN3-214ENST00000542663 POP5Q969H6 163 aaKnown RBP15.07■□□□□ 0
CLSTN3-214ENST00000542663 OR52B2Q96RD2 323 aa15.07■□□□□ 0
CLSTN3-214ENST00000542663 ZMAT3Q9HA38 289 aaKnown RBP15.07■□□□□ 0
CLSTN3-214ENST00000542663 UBAP1Q9NZ09 502 aa15.07■□□□□ 0
CLSTN3-214ENST00000542663 SLAMF8Q9P0V8 285 aa15.07■□□□□ 0
CLSTN3-214ENST00000542663 NUP50Q9UKX7 468 aa15.07■□□□□ 0
CLSTN3-214ENST00000542663 ISPDA4D126 451 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 ZSCAN5BA6NJL1 495 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 TRAPPC2LH3BP13 241 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 SPRY3O43610 288 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 ENTPD5O75356 428 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 PTHP01270 115 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 MT-ND5P03915 603 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 RBMXP38159 391 aaKnown RBP15.06■□□□□ 0
CLSTN3-214ENST00000542663 MOGQ16653 247 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 HIST3H3Q16695 136 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 TNFAIP8L3Q5GJ75 292 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 ARMCX4Q5H9R4 360 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 GCNT6Q5T4J0 391 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 KRT73Q86Y46 540 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 TREML1Q86YW5 311 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 ZNF101Q8IZC7 436 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 RBM15BQ8NDT2 890 aaKnown RBP15.06■□□□□ 0
CLSTN3-214ENST00000542663 OR1J2Q8NGS2 313 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 IPCEF1Q8WWN9 437 aaPredicted RBP15.06■□□□□ 0
CLSTN3-214ENST00000542663 SPATA5L1Q9BVQ7 753 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 DCAF16Q9NXF7 216 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 PLEK2Q9NYT0 353 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 PURGQ9UJV8 347 aaKnown RBP15.06■□□□□ 0
CLSTN3-214ENST00000542663 TRIM33Q9UPN9 1127 aa15.06■□□□□ 0
CLSTN3-214ENST00000542663 IQCMA0A1B0GVH7 501 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 OR6A2O95222 327 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 LYPD3O95274 346 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 RNASE1P07998 156 aaKnown RBP15.05■□□□□ -0
CLSTN3-214ENST00000542663 WNT5AP41221 380 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 ATP4BP51164 291 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 WDR4P57081 412 aaKnown RBP15.05■□□□□ -0
CLSTN3-214ENST00000542663 BAMBIQ13145 260 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 ZNF74Q16587 644 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 NRN1LQ496H8 165 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 SPATA46Q5T0L3 261 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 LRIF1Q5T3J3 769 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 HHATQ5VTY9 493 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 LRRC18Q8N456 261 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 GOLGA6L1Q8N7Z2 621 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 ST7LQ8TDW4 575 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 MCHR2Q969V1 340 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 MARS2Q96GW9 593 aaKnown RBP15.05■□□□□ -0
CLSTN3-214ENST00000542663 ZNF347Q96SE7 839 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 PAIP2Q9BPZ3 127 aaKnown RBP15.05■□□□□ -0
CLSTN3-214ENST00000542663 IKZF5Q9H5V7 419 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 NPHS2Q9NP85 383 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 KCNK9Q9NPC2 374 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 THAP1Q9NVV9 213 aa15.05■□□□□ -0
CLSTN3-214ENST00000542663 POLR3KQ9Y2Y1 108 aaPredicted RBP15.05■□□□□ -0
CLSTN3-214ENST00000542663 A0A0G2JK05 382 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 POM121CA8CG34 1229 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 UBDO15205 165 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 RNF13O43567 381 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 CHP2O43745 196 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 FOXH1O75593 365 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 CH25HO95992 272 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 IGHV2-70P01814 119 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 THY1P04216 161 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 ADH4P08319 380 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 AQP1P29972 269 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 SEC61A1P61619 476 aaKnown RBP15.04■□□□□ -0
CLSTN3-214ENST00000542663 IL13RA1P78552 427 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 PLP2Q04941 152 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 ZNF154Q13106 437 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 SCARB2Q14108 478 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 PABPC1L2AQ5JQF8 200 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 THEM4Q5T1C6 240 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 RANBP3LQ86VV4 465 aaPredicted RBP15.04■□□□□ -0
CLSTN3-214ENST00000542663 SYT14Q8NB59 555 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms