RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 OR2V1Q8NHB1 315 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 WDR36Q8NI36 951 aaKnown RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 STOML3Q8TAV4 291 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 ITFG1Q8TB96 612 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 SFT2D1Q8WV19 159 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 RLN3Q8WXF3 142 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 TAF15Q92804 592 aaKnown RBP eCLIP2.69□□□□□ -1.98
USP28-210ENST00000542033 FBXO32Q969P5 355 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 TMEM203Q969S6 136 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 MAGOHBQ96A72 148 aaKnown RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 MCUR1Q96AQ8 359 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 PPWD1Q96BP3 646 aaKnown RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 C12orf43Q96C57 262 aaKnown RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 RASD2Q96D21 266 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 ZHX1-C8orf76Q96EF9 292 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 PCED1BQ96HM7 432 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 SLC45A3Q96JT2 553 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 FAM210BQ96KR6 192 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 MAGEB18Q96M61 343 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 ACCSQ96QU6 501 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 SORT1Q99523 831 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 P2RY13Q9BPV8 354 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 TUBGCP2Q9BSJ2 902 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 RAB11FIP5Q9BXF6 653 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 ERVK-6Q9BXR3 956 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 YTHDF1Q9BYJ9 559 aaKnown RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 ROPN1BQ9BZX4 212 aaPredicted RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 PKIBQ9C010 78 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 MIXL1Q9H2W2 232 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 ANKRD19PQ9H560 264 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 RPF2Q9H7B2 306 aaKnown RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 NIT2Q9NQR4 276 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 FBXO8Q9NRD0 319 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 IMP3Q9NV31 184 aaKnown RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 SMPD3Q9NY59 655 aaPredicted RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 PTTG3PQ9NZH4 202 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 CD274Q9NZQ7 290 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 VAPAQ9P0L0 249 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 PAK5Q9P286 719 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 COPZ2Q9P299 210 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 P2RX2Q9UBL9 471 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 MLXQ9UH92 298 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 MUTYHQ9UIF7 546 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 NAGKQ9UJ70 344 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 SNX12Q9UMY4 172 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 RNF24Q9Y225 148 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.69□□□□□ -1.98
USP28-210ENST00000542033 GOLT1BQ9Y3E0 138 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 ATG4BQ9Y4P1 393 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 MAB21L2Q9Y586 359 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 KIF20BQ96Q89 1820 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 MYH7BA7E2Y1 1941 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 MYH1P12882 1939 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 ADGRB2O60241 1585 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 CEP170BQ9Y4F5 1589 aaPredicted RBP2.69□□□□□ -1.98
USP28-210ENST00000542033 PBRM1Q86U86 1689 aa2.69□□□□□ -1.98
USP28-210ENST00000542033 NEDD4P46934 1319 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 SYCP2Q9BX26 1530 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 USP32Q8NFA0 1604 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 MYH2Q9UKX2 1941 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 A0A0U1RQS6 177 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 A0A0X1KG70 313 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 RNF222A6NCQ9 220 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 CCDC182A6NF36 153 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 WASHC1A8K0Z3 465 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 ERI2A8K979 691 aaKnown RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 PP2D1A8MPX8 630 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 KRTAP16-1A8MUX0 517 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 WASH3PC4AMC7 463 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 F8VP50 259 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 M0QZ92 97 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 SOCS3O14543 225 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 PRMT5O14744 637 aaPredicted RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 SH2D1BO14796 132 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 SIGLEC5O15389 551 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 GYG2O15488 501 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 RGS16O15492 202 aaPredicted RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 CFLARO15519 480 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 LRCH4O75427 683 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 ANXA9O76027 345 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 SRP72O76094 671 aaKnown RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 C2P06681 752 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 KLK3P07288 261 aaPredicted RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 STAG3L2P0CL84 134 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 MYOGP15173 224 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 RPA2P15927 270 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 MSR1P21757 451 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 ATP5A1P25705 553 aaKnown RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 GPR183P32249 361 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 MPIP34949 423 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 MAP3K8P41279 467 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 CAPZBP47756 277 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 SERPINB10P48595 397 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 IDH3GP51553 393 aaPredicted RBP2.68□□□□□ -1.98
USP28-210ENST00000542033 NDUFA8P51970 172 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 SLC18A1P54219 525 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 EMP2P54851 167 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 RAB25P57735 213 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 DEFA1P59665 94 aa2.68□□□□□ -1.98
USP28-210ENST00000542033 DEFA3P59666 94 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms