RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 ACTC1P68032 377 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 ACTA1P68133 377 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 IL9RQ01113 521 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 RBBP4Q09028 425 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 FCHO2Q0JRZ9 810 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 MED21Q13503 144 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 SLC17A1Q14916 467 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 TRAM2Q15035 370 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 ZNF74Q16587 644 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 DUOXA1Q1HG43 343 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 LRRC37A5PQ49AS3 106 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 FAM74A3Q4VXF1 159 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 TP53I3Q53FA7 332 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 CYBRD1Q53TN4 286 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 ACSM5Q6NUN0 579 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 RBM23Q86U06 439 aaKnown RBP4.79□□□□□ -1.64
DDB1-219ENST00000541513 LHFPL3Q86UP9 236 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 HPS6Q86YV9 775 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 FAM71AQ8IYT1 594 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 CDK20Q8IZL9 346 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 ZNF786Q8N393 782 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 OR2L8Q8NGY9 312 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 TCP10LQ8TDR4 215 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 IGFBPL1Q8WX77 278 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 GTF3AQ92664 365 aaKnown RBP4.79□□□□□ -1.64
DDB1-219ENST00000541513 MYDGFQ969H8 173 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 SMARCD1Q96GM5 515 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 CELF6Q96J87 481 aaKnown RBP4.79□□□□□ -1.64
DDB1-219ENST00000541513 C4orf45Q96LM5 186 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 RANBP9Q96S59 729 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 ADOQ96SZ5 270 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 CSF3RQ99062 836 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 TOLLIPQ9H0E2 274 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 EBF3Q9H4W6 596 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 IKZF5Q9H5V7 419 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 UBE2ZQ9H832 354 aaPredicted RBP4.79□□□□□ -1.64
DDB1-219ENST00000541513 ZC4H2Q9NQZ6 224 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 THSD1Q9NS62 852 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 PARVAQ9NVD7 372 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 PACSIN3Q9UKS6 424 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 AK6Q9Y3D8 172 aaKnown RBP4.79□□□□□ -1.64
DDB1-219ENST00000541513 HYOU1Q9Y4L1 999 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 INSL5Q9Y5Q6 135 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 TSSC4Q9Y5U2 329 aaPredicted RBP4.79□□□□□ -1.64
DDB1-219ENST00000541513 SAR1BQ9Y6B6 198 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 TRIOO75962 3097 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 CUL9Q8IWT3 2517 aa4.79□□□□□ -1.64
DDB1-219ENST00000541513 F5P12259 2224 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 XIRP2A4UGR9 3374 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 UNC80Q8N2C7 3258 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 KIF26AQ9ULI4 1882 aaPredicted RBP4.78□□□□□ -1.64
DDB1-219ENST00000541513 NSG1A0A0A6YYJ2 146 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 A0A0G2JNG1 304 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 LRRN3E7EW58 273 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 ZNF195O14628 629 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 LINC01565O15544 149 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 SYNGR3O43761 229 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 HSBP1O75506 76 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 SEC24AO95486 1093 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 F10P00742 488 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 CA1P00915 261 aaPredicted RBP4.78□□□□□ -1.64
DDB1-219ENST00000541513 IFNW1P05000 195 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 ATP1B1P05026 303 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 UMODP07911 640 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 FAM106CPP0CH98 169 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 PRSS56P0CW18 603 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 BCKDHAP12694 445 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 COMTP21964 271 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 UGT2B10P36537 528 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 ACVR1BP36896 505 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 RPL3P39023 403 aaKnown RBP4.78□□□□□ -1.64
DDB1-219ENST00000541513 ID1P41134 155 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 OPRD1P41143 372 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 NSG1P42857 185 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 RASSF2P50749 326 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 RPL14P50914 215 aaKnown RBP4.78□□□□□ -1.64
DDB1-219ENST00000541513 AP1S2P56377 157 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 SEC61A1P61619 476 aaKnown RBP4.78□□□□□ -1.64
DDB1-219ENST00000541513 RPL10AP62906 217 aaKnown RBP4.78□□□□□ -1.64
DDB1-219ENST00000541513 PITPNAQ00169 270 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 ZNF234Q14588 700 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 KIR2DS5Q14953 304 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 C3AR1Q16581 482 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 ZNF672Q499Z4 452 aaPredicted RBP4.78□□□□□ -1.64
DDB1-219ENST00000541513 PPM1LQ5SGD2 360 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 C1orf146Q5VVC0 180 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 BSPRYQ5W0U4 402 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 OR4C11Q6IEV9 310 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 SYCE2Q6PIF2 218 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 LCLAT1Q6UWP7 414 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 SLC25A48Q6ZT89 311 aaKnown RBP4.78□□□□□ -1.64
DDB1-219ENST00000541513 TIPARPQ7Z3E1 657 aaKnown RBP4.78□□□□□ -1.64
DDB1-219ENST00000541513 GLCCI1Q86VQ1 547 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 SLC35F2Q8IXU6 374 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 C12orf29Q8N999 325 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 SMRP1Q8NCR6 262 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 OR2AP1Q8NGE2 309 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 OR5L2Q8NGL0 311 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 OR5M1Q8NGP8 315 aa4.78□□□□□ -1.64
DDB1-219ENST00000541513 PLPPR1Q8TBJ4 325 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms