RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 ASB6Q9NWX5 421 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 IMPAD1Q9NX62 359 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 UBAP1Q9NZ09 502 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 GLTPQ9NZD2 209 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 DNAJC27Q9NZQ0 273 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 VSX1Q9NZR4 365 aaPredicted RBP8.25□□□□□ -1.09
DDX55-208ENST00000541259 PRSS50Q9UI38 385 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 FOXD3Q9UJU5 478 aaPredicted RBP8.25□□□□□ -1.09
DDX55-208ENST00000541259 RCE1Q9Y256 329 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 EMC9Q9Y3B6 208 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 EIF4E1BA6NMX2 242 aaKnown RBP8.24□□□□□ -1.09
DDX55-208ENST00000541259 PRR23D1E9PI22 279 aaPredicted RBP8.24□□□□□ -1.09
DDX55-208ENST00000541259 PYCARD-AS1I3L0S3 204 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 DENRO43583 198 aaKnown RBP8.24□□□□□ -1.09
DDX55-208ENST00000541259 AKAP8O43823 692 aaKnown RBP8.24□□□□□ -1.09
DDX55-208ENST00000541259 SLC16A7O60669 478 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 ENTPD6O75354 484 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 RENP00797 406 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 CGAP01215 116 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 QDPRP09417 244 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 FAM157BP0CG42 384 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 PRR23D2P0DMB1 279 aaPredicted RBP8.24□□□□□ -1.09
DDX55-208ENST00000541259 CTLA4P16410 223 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 ZNF3P17036 446 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 SPI1P17947 270 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 SLC2A5P22732 501 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 CTSSP25774 331 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 PYCR1P32322 319 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 OR3A2P47893 321 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 CSNK1A1P48729 337 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 CASP6P55212 293 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 SNRPGP62308 76 aaKnown RBP8.24□□□□□ -1.09
DDX55-208ENST00000541259 CDK5R2Q13319 367 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 IL18R1Q13478 541 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 SMN1Q16637 294 aaKnown RBP8.24□□□□□ -1.09
DDX55-208ENST00000541259 RIPPLY2Q5TAB7 128 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 AADACL4Q5VUY2 407 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 OTPQ5XKR4 325 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 TMEM211Q6ICI0 200 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 SLC25A47Q6Q0C1 308 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 TFAP2EQ6VUC0 442 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 B3GLCTQ6Y288 498 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 THAP5Q7Z6K1 395 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 ADCK1Q86TW2 530 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 FJX1Q86VR8 437 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 LIX1LQ8IVB5 337 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 ZNF100Q8IYN0 542 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 OR6V1Q8N148 313 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 FAM26EQ8N5C1 309 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 OR8J1Q8NGP2 316 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 OR6K3Q8NGY3 331 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 FBLIM1Q8WUP2 373 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 TRUB1Q8WWH5 349 aaKnown RBP8.24□□□□□ -1.09
DDX55-208ENST00000541259 NANOS1Q8WY41 292 aaKnown RBP8.24□□□□□ -1.09
DDX55-208ENST00000541259 NSMAFQ92636 917 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 HTRA1Q92743 480 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 MCHR2Q969V1 340 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 APH1AQ96BI3 265 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 LRR1Q96L50 414 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 ZNF582Q96NG8 517 aaPredicted RBP8.24□□□□□ -1.09
DDX55-208ENST00000541259 RBP7Q96R05 134 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 SNX18Q96RF0 628 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 ALG12Q9BV10 488 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 PRRG3Q9BZD7 231 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 OPN3Q9H1Y3 402 aaPredicted RBP8.24□□□□□ -1.09
DDX55-208ENST00000541259 OR51V1Q9H2C8 321 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 RERGLQ9H628 205 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 PLSCR4Q9NRQ2 329 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 PARPBPQ9NWS1 579 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 B9D1Q9UPM9 204 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 HCFC1P51610 2035 aa8.24□□□□□ -1.09
DDX55-208ENST00000541259 SPTBN1Q01082 2364 aaKnown RBP8.24□□□□□ -1.09
DDX55-208ENST00000541259 IGLV1-36A0A0B4J1U3 117 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 CCDC182A6NF36 153 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 HSPB2A8KAH6 182 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 LRRTM2O43300 516 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 SCG5P05408 212 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 CRHP06850 196 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 FMO3P31513 532 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 CDAP32320 146 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 SLC25A1P53007 311 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 NUDT6P53370 316 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 ADORA2A-AS1P86434 159 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 APOFQ13790 326 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 HSPB2Q16082 182 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 KLHL12Q53G59 568 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 THEM4Q5T1C6 240 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 C9orf135Q5VTT2 229 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 LYPD4Q6UWN0 246 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 HDDC2Q7Z4H3 204 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 UBE2J2Q8N2K1 259 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 GPR137CQ8N3F9 429 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 ZNF610Q8N9Z0 462 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 SETD9Q8NE22 299 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 RND1Q92730 232 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 ZFP3Q96NJ6 502 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 ALKBH3Q96Q83 286 aaPredicted RBP8.23□□□□□ -1.09
DDX55-208ENST00000541259 LINC00470Q9BZP3 86 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 SLCO5A1Q9H2Y9 848 aa8.23□□□□□ -1.09
DDX55-208ENST00000541259 GPR35Q9HC97 309 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms