RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 PIP5KL1Q5T9C9 394 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 ATF7IP2Q5U623 682 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 METTL21CQ5VZV1 264 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 CLEC6AQ6EIG7 209 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 PRMT9Q6P2P2 845 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 UNQ9370/PRO34162Q6UXP9 181 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 RTL4Q6ZR62 310 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 IQCKQ8N0W5 287 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 OR52I1Q8NGK6 324 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 RDH5Q92781 318 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 ZNF514Q96K75 400 aaPredicted RBP3.66□□□□□ -1.82
YBX3-210ENST00000540975 OLFM3Q96PB7 478 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 VPS35Q96QK1 796 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 OR5B2Q96R09 309 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 MCHR1Q99705 422 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 ACBD6Q9BR61 282 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 SLC30A2Q9BRI3 323 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 GON7Q9BXV9 100 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 TMEM117Q9H0C3 514 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 TDRD3Q9H7E2 651 aaKnown RBP3.66□□□□□ -1.82
YBX3-210ENST00000540975 RMND5AQ9H871 391 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 CYP3A43Q9HB55 503 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 VCX3AQ9NNX9 186 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 NT5MQ9NPB1 228 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 NGBQ9NPG2 151 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 DDX19AQ9NUU7 478 aaKnown RBP3.66□□□□□ -1.82
YBX3-210ENST00000540975 SCML2Q9UQR0 700 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 ZFYVE9O95405 1425 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 INO80Q9ULG1 1556 aaPredicted RBP3.66□□□□□ -1.82
YBX3-210ENST00000540975 CRYBG1Q9Y4K1 1723 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 DEPDC5O75140 1603 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 USP32Q8NFA0 1604 aa3.66□□□□□ -1.82
YBX3-210ENST00000540975 TET3O43151 1660 aa3.65□□□□□ -1.82
YBX3-210ENST00000540975 KDM5AP29375 1690 aaKnown RBP3.65□□□□□ -1.82
YBX3-210ENST00000540975 CEMIPQ8WUJ3 1361 aa3.65□□□□□ -1.82
YBX3-210ENST00000540975 GLI2P10070 1586 aa3.65□□□□□ -1.82
YBX3-210ENST00000540975 OVOS2A0A0G2JMS6 1433 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 OVOS2A0A0J9YW53 1432 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 OVOS2Q6IE36 1432 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 C12orf71A8MTZ7 269 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 LAD1O00515 517 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 AIM2O14862 343 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 DUX1O43812 170 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 ECI2O75521 394 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 SERPINB7O75635 380 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 RAB3DO95716 219 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 APOA1P02647 267 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 PCCBP05166 539 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 FABP1P07148 127 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 KRT16P08779 473 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 PTNP21246 168 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 TUBG1P23258 451 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 GTF2H1P32780 548 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 PRMT2P55345 433 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 CLDN8P56748 225 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 KRTAP10-1P60331 282 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 SPCS3P61009 180 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 VSNL1P62760 191 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 ELF3P78545 371 aaPredicted RBP3.65□□□□□ -1.83
YBX3-210ENST00000540975 CYP24A1Q07973 514 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 NAB1Q13506 487 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 CEBPEQ15744 281 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 CHI3L2Q15782 390 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 YIF1BQ5BJH7 314 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 TTC33Q6PID6 262 aaPredicted RBP3.65□□□□□ -1.83
YBX3-210ENST00000540975 C4orf22Q6V702 233 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 IDO2Q6ZQW0 420 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 BHLHA15Q7RTS1 189 aaPredicted RBP3.65□□□□□ -1.83
YBX3-210ENST00000540975 OFCC1Q8IZS5 231 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 ZNF786Q8N393 782 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 CERS5Q8N5B7 392 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 BCORP1Q8N888 145 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 BPIFCQ8NFQ6 507 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 OR5T1Q8NG75 326 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 HTR3CQ8WXA8 447 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 ING5Q8WYH8 240 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 STARD4Q96DR4 205 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 SAMD8Q96LT4 415 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 MBOAT4Q96T53 435 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 TPPP3Q9BW30 176 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 CHID1Q9BWS9 393 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 OR51B6Q9H340 312 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 METTL7AQ9H8H3 244 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 TUBG2Q9NRH3 451 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 CYTL1Q9NRR1 136 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 ZNF229Q9UJW7 825 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 STAP1Q9ULZ2 295 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 PRG3Q9Y2Y8 225 aaPredicted RBP3.65□□□□□ -1.83
YBX3-210ENST00000540975 PLLPQ9Y342 182 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 PUS1Q9Y606 427 aaKnown RBP eCLIP3.65□□□□□ -1.83
YBX3-210ENST00000540975 TCHHQ07283 1943 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 MYO3AQ8NEV4 1616 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 ERVK-7P63135 1459 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 ZNF518AQ6AHZ1 1483 aa3.65□□□□□ -1.83
YBX3-210ENST00000540975 SPHKAPQ2M3C7 1700 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 ATP10DQ9P241 1426 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 MAP3K4Q9Y6R4 1608 aa3.64□□□□□ -1.83
YBX3-210ENST00000540975 A0A1B0GWB2 263 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms