RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 SLC36A2Q495M3 483 aa12.38□□□□□ -0.43
RTN3-210ENST00000540798 TEX30Q5JUR7 227 aa12.38□□□□□ -0.43
RTN3-210ENST00000540798 FAM199XQ6PEV8 388 aaPredicted RBP12.38□□□□□ -0.43
RTN3-210ENST00000540798 PLET1Q6UQ28 207 aa12.38□□□□□ -0.43
RTN3-210ENST00000540798 NHLRC1Q6VVB1 395 aa12.38□□□□□ -0.43
RTN3-210ENST00000540798 LGALS14Q8TCE9 139 aa12.38□□□□□ -0.43
RTN3-210ENST00000540798 UPRTQ96BW1 309 aa12.38□□□□□ -0.43
RTN3-210ENST00000540798 ORAI1Q96D31 301 aa12.38□□□□□ -0.43
RTN3-210ENST00000540798 MRGPRX4Q96LA9 322 aa12.38□□□□□ -0.43
RTN3-210ENST00000540798 C4orf45Q96LM5 186 aa12.38□□□□□ -0.43
RTN3-210ENST00000540798 DCBLD2Q96PD2 775 aa12.38□□□□□ -0.43
RTN3-210ENST00000540798 CAMK2AQ9UQM7 478 aa12.38□□□□□ -0.43
RTN3-210ENST00000540798 WIF1Q9Y5W5 379 aa12.38□□□□□ -0.43
RTN3-210ENST00000540798 A6NIZ1 184 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 ZNF593O00488 134 aaPredicted RBP12.37□□□□□ -0.43
RTN3-210ENST00000540798 SLC16A7O60669 478 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 MTRF1O75570 445 aaKnown RBP12.37□□□□□ -0.43
RTN3-210ENST00000540798 RAF1P04049 648 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 CFPP27918 469 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 BTCP35070 178 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 RPS27P42677 84 aaKnown RBP12.37□□□□□ -0.43
RTN3-210ENST00000540798 DUSP3P51452 185 aaPredicted RBP12.37□□□□□ -0.43
RTN3-210ENST00000540798 CCR9P51686 369 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 RAP1BP61224 184 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 RAP1AP62834 184 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 RASGEF1BQ0VAM2 473 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 GPR176Q14439 515 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 SLC23A3Q6PIS1 610 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 H1FNTQ75WM6 255 aaPredicted RBP12.37□□□□□ -0.43
RTN3-210ENST00000540798 GLCCI1Q86VQ1 547 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 C1orf210Q8IVY1 113 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 POC1BQ8TC44 478 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 SLC7A6Q92536 515 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 YIPF5Q969M3 257 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 DDIT4LQ96D03 193 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 NXPE2Q96DL1 559 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 CITED4Q96RK1 184 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 MRI1Q9BV20 369 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 ZMAT5Q9UDW3 170 aaKnown RBP12.37□□□□□ -0.43
RTN3-210ENST00000540798 ZNF221Q9UK13 617 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 GDF9O60383 454 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 OR2J2O76002 312 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 CRABP1P29762 137 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 AGFG1P52594 562 aaKnown RBP12.37□□□□□ -0.43
RTN3-210ENST00000540798 PITPNAQ00169 270 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 SIGLEC14Q08ET2 396 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 SLC17A1Q14916 467 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 PCK2Q16822 640 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 PLA1AQ53H76 456 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 PXDC1Q5TGL8 231 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 STAC2Q6ZMT1 411 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 LRRC69Q6ZNQ3 347 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 WDFY1Q8IWB7 410 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 OR10G3Q8NGC4 313 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 SLC22A8Q8TCC7 542 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 RNF128Q8TEB7 428 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 THEM6Q8WUY1 208 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 KCNK17Q96T54 332 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 SLC25A18Q9H1K4 315 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 IKZF2Q9UKS7 526 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 A0A1B0GTH9 108 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 A0A1B0GVC2 190 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 A0A1W2PNV4 684 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 A6NIN4 97 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 LIPT2A6NK58 231 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 PRKACAP17612 351 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 ADRA2CP18825 462 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 MC2RQ01718 297 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 MELKQ14680 651 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 ETFDHQ16134 617 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 FAM198BQ6UWH4 519 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 ZNF679Q8IYX0 411 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 NTNG2Q96CW9 530 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 RASL10BQ96S79 203 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 HDHD2Q9H0R4 259 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 CHST11Q9NPF2 352 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 KLRF1Q9NZS2 232 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 PPP4R1LQ9P1A2 415 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 ING1Q9UK53 422 aaPredicted RBP12.37□□□□□ -0.43
RTN3-210ENST00000540798 V9GY05 133 aa12.37□□□□□ -0.43
RTN3-210ENST00000540798 CENPBD1B2RD01 187 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 UMODP07911 640 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 CSRP1P21291 193 aaKnown RBP12.36□□□□□ -0.43
RTN3-210ENST00000540798 RSBN1Q5VWQ0 802 aaPredicted RBP12.36□□□□□ -0.43
RTN3-210ENST00000540798 FAM205BPQ63HN1 556 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 ZNF57Q68EA5 555 aaPredicted RBP12.36□□□□□ -0.43
RTN3-210ENST00000540798 SLC18B1Q6NT16 456 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 GLRX5Q86SX6 157 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 NSMAFQ92636 917 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 MCHR2Q969V1 340 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 CREB3L1Q96BA8 519 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 SLC25A38Q96DW6 304 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 SPACA9Q96E40 222 aaPredicted RBP12.36□□□□□ -0.43
RTN3-210ENST00000540798 MOV10Q9HCE1 1003 aaKnown RBP12.36□□□□□ -0.43
RTN3-210ENST00000540798 SDHAF3Q9NRP4 125 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 ALKBH4Q9NXW9 302 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 KLHL13Q9P2N7 655 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 NLKQ9UBE8 527 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 TEKT2Q9UIF3 430 aa12.36□□□□□ -0.43
RTN3-210ENST00000540798 FAM240BA0A1B0GVZ2 78 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms