RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 OR10J1P30954 320 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 ALDH3B1P43353 468 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 PTH2RP49190 550 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 NDUFV1P49821 464 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 EFNA3P52797 238 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 CLDN18P56856 261 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 IL2P60568 153 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 HBA1P69905 142 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 RPL19P84098 196 aaKnown RBP5.6□□□□□ -1.51
SNHG1-211ENST00000539921 SRSF3P84103 164 aaKnown RBP5.6□□□□□ -1.51
SNHG1-211ENST00000539921 HTD2P86397 168 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 FAM3AP98173 230 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 PAX5Q02548 391 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 PNRC1Q12796 327 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-211ENST00000539921 OLIG2Q13516 323 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 TRA2AQ13595 282 aaKnown RBP eCLIP5.6□□□□□ -1.512e-56■■■■□ 20.9
SNHG1-211ENST00000539921 CBFBQ13951 182 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 DECR1Q16698 335 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 ZNF750Q32MQ0 723 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 BSXQ3C1V8 233 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 ZNF789Q5FWF6 425 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 MFSD14CQ5VZR4 134 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 OR2T2Q6IF00 324 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 ETFRF1Q6IPR1 90 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 PGBD2Q6P3X8 592 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 TNFAIP8L2Q6P589 184 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-211ENST00000539921 TRIM40Q6P9F5 258 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 COLCA1Q6ZS62 124 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 CLEC20AQ6ZU45 233 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 ERN2Q76MJ5 926 aaKnown RBP5.6□□□□□ -1.51
SNHG1-211ENST00000539921 SLC35E3Q7Z769 313 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 TGIF2LYQ8IUE0 185 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 GABRG1Q8N1C3 465 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 TTC16Q8NEE8 873 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 OR6T1Q8NGN1 323 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 OR10G4Q8NGN3 311 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 OR2L2Q8NH16 312 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 OR52I2Q8NH67 350 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 DUSP19Q8WTR2 217 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 DNASE2BQ8WZ79 361 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 GTPBP3Q969Y2 492 aaKnown RBP5.6□□□□□ -1.51
SNHG1-211ENST00000539921 TMEM106AQ96A25 262 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 PPCDCQ96CD2 204 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 CTHRC1Q96CG8 243 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 S100A16Q96FQ6 103 aaKnown RBP5.6□□□□□ -1.51
SNHG1-211ENST00000539921 BTF3L4Q96K17 158 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 ALKBH3Q96Q83 286 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-211ENST00000539921 ALKBH7Q9BT30 221 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-211ENST00000539921 ACTRT3Q9BYD9 372 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 SELENOIQ9C0D9 397 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 AUNIPQ9H7T9 357 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 TBC1D17Q9HA65 648 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 WFDC1Q9HC57 220 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 MEPEQ9NQ76 525 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-211ENST00000539921 CYTL1Q9NRR1 136 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 SOHLH2Q9NX45 425 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 KLHL28Q9NXS3 571 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 SLC2A8Q9NY64 477 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 PLEK2Q9NYT0 353 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 RHCGQ9UBD6 479 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 SLC2A6Q9UGQ3 507 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 SHPKQ9UHJ6 478 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 ADAM29Q9UKF5 820 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 ZNF346Q9UL40 294 aaKnown RBP5.6□□□□□ -1.51
SNHG1-211ENST00000539921 FOXJ3Q9UPW0 622 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 JAG2Q9Y219 1238 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 MEMO1Q9Y316 297 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 ZNF236Q9UL36 1845 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 LOC285556D6RIA3 1793 aa5.6□□□□□ -1.51
SNHG1-211ENST00000539921 TRAV30A0A087WSZ9 112 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 C2orf78A6NCI8 922 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 TLCD2A6NGC4 264 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 UMAD1C9J7I0 102 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 F6UZH7 168 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 H3BN98 237 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 M0R036 132 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 M0R129 80 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 ZNF208O43345 1280 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 TLX2O43763 284 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-211ENST00000539921 GCM2O75603 506 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-211ENST00000539921 TNFSF13O75888 250 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 OR2J2O76002 312 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 ZNF432O94892 652 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 SCAF4O95104 1147 aaKnown RBP5.59□□□□□ -1.51
SNHG1-211ENST00000539921 CSTAP01040 98 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 AMBPP02760 352 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 FGF1P05230 155 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 OR2T7P0C7T2 308 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 CT45A8P0DMV1 189 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 CT45A9P0DMV2 189 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 MSR1P21757 451 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 BMP5P22003 454 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 DGKAP23743 735 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 ZBTB25P24278 435 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 SNCAP37840 140 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 PPICP45877 212 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 P2RX1P51575 399 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 PGGT1BP53609 377 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 PTTG1IPP53801 180 aa5.59□□□□□ -1.51
SNHG1-211ENST00000539921 PRRX1P54821 245 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms