RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 PLCL2Q9UPR0 1127 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 FOXJ3Q9UPW0 622 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 MRPS7Q9Y2R9 242 aaKnown RBP6.96□□□□□ -1.3
CCDC60-204ENST00000539847 BOD1L1Q8NFC6 3051 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 FLNCQ14315 2725 aa6.96□□□□□ -1.3
CCDC60-204ENST00000539847 NUP214P35658 2090 aaPredicted RBP6.96□□□□□ -1.3
CCDC60-204ENST00000539847 TRPM6Q9BX84 2022 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 LRIT2A6NDA9 550 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 ACOD1A6NK06 481 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 CPSF4LA6NMK7 179 aaKnown RBP6.95□□□□□ -1.3
CCDC60-204ENST00000539847 A8MUA0 341 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 E9PI62 339 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 F5H5P2 479 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 H0YC42 278 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 H7BY64 318 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 H7C417 338 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 J3QLW9 94 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 SULT1C2O00338 296 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 ARPC1BO15143 372 aaKnown RBP6.95□□□□□ -1.3
CCDC60-204ENST00000539847 PRAMEF2O60811 474 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 KCNJ13O60928 360 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 CTNSO60931 367 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 RDH16O75452 317 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 TNFSF15O95150 251 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 PCDH8O95206 1070 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 LYPD3O95274 346 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 SLC2A10O95528 541 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 CH25HO95992 272 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 AK1P00568 194 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 CD8AP01732 235 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 THY1P04216 161 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 THBDP07204 575 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 CSF1P09603 554 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 ADRB3P13945 408 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF19P17023 458 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF3P17036 446 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 HLA-GP17693 338 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 SRMP19623 302 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 DRD5P21918 477 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 RPS4Y1P22090 263 aaKnown RBP6.95□□□□□ -1.3
CCDC60-204ENST00000539847 CD82P27701 267 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 MPGP29372 298 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 CCKBRP32239 447 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 TRHRP34981 398 aaPredicted RBP6.95□□□□□ -1.3
CCDC60-204ENST00000539847 VEGFCP49767 419 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 GDI2P50395 445 aaKnown RBP6.95□□□□□ -1.3
CCDC60-204ENST00000539847 BLKP51451 505 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 ART1P52961 327 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 RAB8AP61006 207 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 RPS11P62280 158 aaKnown RBP eCLIP6.95□□□□□ -1.3
CCDC60-204ENST00000539847 YPEL5P62699 121 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 EEF1A1P68104 462 aaKnown RBP6.95□□□□□ -1.3
CCDC60-204ENST00000539847 SLC3A1Q07837 685 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 SRSF1Q07955 248 aaKnown RBP eCLIP6.95□□□□□ -1.3
CCDC60-204ENST00000539847 FOXD4Q12950 439 aaPredicted RBP6.95□□□□□ -1.3
CCDC60-204ENST00000539847 SGCGQ13326 291 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF345Q14585 488 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 RBMS2Q15434 407 aaKnown RBP6.95□□□□□ -1.3
CCDC60-204ENST00000539847 ARHGAP11BQ3KRB8 267 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 POM121L1PQ3SYA9 428 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 PRRT3Q5FWE3 981 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 C10orf91Q5T1B1 145 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 SFRP4Q6FHJ7 346 aaPredicted RBP6.95□□□□□ -1.3
CCDC60-204ENST00000539847 SLC25A25Q6KCM7 469 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 SLC48A1Q6P1K1 146 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 ARHGAP11AQ6P4F7 1023 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 GUSBP11Q6P575 273 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF613Q6PF04 617 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 IL20RBQ6UXL0 311 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 B3GLCTQ6Y288 498 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF574Q6ZN55 896 aaPredicted RBP6.95□□□□□ -1.3
CCDC60-204ENST00000539847 KCNRGQ8N5I3 272 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 LILRA3Q8N6C8 439 aaPredicted RBP6.95□□□□□ -1.3
CCDC60-204ENST00000539847 NUP43Q8NFH3 380 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 OR2AK2Q8NG84 335 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 OR6N1Q8NGY5 312 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 OR14A16Q8NHC5 309 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 CCDC107Q8WV48 283 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 TMEM239Q8WW34 195 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 ARRDC3Q96B67 414 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 C4orf36Q96KX1 117 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 C10orf90Q96M02 699 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 PRSS27Q9BQR3 290 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 SORBS1Q9BX66 1292 aaKnown RBP6.95□□□□□ -1.3
CCDC60-204ENST00000539847 STRADBQ9C0K7 418 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 OR10A4Q9H209 315 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 CDCP1Q9H5V8 836 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 EQTNQ9NQ60 294 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 BIN3Q9NQY0 253 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 HPF1Q9NWY4 346 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 MTFP1Q9UDX5 166 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 IL36AQ9UHA7 158 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 RCE1Q9Y256 329 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 SIGLEC7Q9Y286 467 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF443Q9Y2A4 671 aaPredicted RBP6.95□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF281Q9Y2X9 895 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 V9GY05 133 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 DOPEY2Q9Y3R5 2298 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 USP9YO00507 2555 aaPredicted RBP6.95□□□□□ -1.3
CCDC60-204ENST00000539847 SPTBN1Q01082 2364 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms