RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ZNF417Q8TAU3 575 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 RHBDD1Q8TEB9 315 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 PTPMT1Q8WUK0 201 aaPredicted RBP13.16□□□□□ -0.3
CDCA3-207ENST00000538862 CCDC74AQ96AQ1 378 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 LAT2Q9GZY6 243 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 CHRNA10Q9GZZ6 450 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 FKRPQ9H9S5 495 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 TAS2R10Q9NYW0 307 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 MRPL15Q9P015 296 aaKnown RBP13.16□□□□□ -0.3
CDCA3-207ENST00000538862 KLK11Q9UBX7 282 aa13.16□□□□□ -0.3
CDCA3-207ENST00000538862 NOSIPQ9Y314 301 aaKnown RBP13.16□□□□□ -0.3
CDCA3-207ENST00000538862 FRYQ5TBA9 3013 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 TRBV5-7A0A0A0MS05 114 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 LILRA5A6NI73 299 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 TMEM212A6NML5 194 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 OR4C45A6NMZ5 311 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 ZNF254O75437 659 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 HIST1H2ABP04908 130 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 CPN1P15169 458 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 ALOX5APP20292 161 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 CDK2P24941 298 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 MST1P26927 711 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 CD1CP29017 333 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 RORAP35398 523 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 SLC6A8P48029 635 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 VEGFCP49767 419 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 TRIP6Q15654 476 aaKnown RBP13.15□□□□□ -0.3
CDCA3-207ENST00000538862 MESTQ5EB52 335 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 TMEM255AQ5JRV8 349 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 EEF1A1P5Q5VTE0 462 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 HIST3H2AQ7L7L0 130 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 THRSPQ92748 146 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 HIST1H2ACQ93077 130 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 TSPAN32Q96QS1 320 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.15□□□□□ -0.3
CDCA3-207ENST00000538862 COMMD4Q9H0A8 199 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 CLEC4MQ9H2X3 399 aaPredicted RBP13.15□□□□□ -0.3
CDCA3-207ENST00000538862 ZNF346Q9UL40 294 aaKnown RBP13.15□□□□□ -0.3
CDCA3-207ENST00000538862 FLVCR2Q9UPI3 526 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 TMA7Q9Y2S6 64 aaKnown RBP13.15□□□□□ -0.3
CDCA3-207ENST00000538862 MMACHCQ9Y4U1 282 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 TMEM184BQ9Y519 407 aaPredicted RBP13.15□□□□□ -0.3
CDCA3-207ENST00000538862 FKBP7Q9Y680 259 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 AKAP13Q12802 2813 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 ASPMQ8IZT6 3477 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 A0A1W2PQ72 361 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 FRG2CA6NGY1 282 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 DCTN6O00399 190 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 IFNA7P01567 189 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 ADRA2CP18825 462 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 SPINK2P20155 84 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 EPHA8P29322 1005 aaPredicted RBP13.15□□□□□ -0.3
CDCA3-207ENST00000538862 TACR3P29371 465 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 ARRB1P49407 418 aaPredicted RBP13.15□□□□□ -0.3
CDCA3-207ENST00000538862 MECP2P51608 486 aaKnown RBP13.15□□□□□ -0.3
CDCA3-207ENST00000538862 TAS2R20P59543 309 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 RASGEF1BQ0VAM2 473 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 FOXC1Q12948 553 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 GLDNQ6ZMI3 551 aaPredicted RBP13.15□□□□□ -0.3
CDCA3-207ENST00000538862 DBX2Q6ZNG2 339 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 NLRC3Q7RTR2 1065 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 OR2T35Q8NGX2 323 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 OR2G2Q8NGZ5 317 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 ZNF563Q8TA94 476 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 SAP25Q8TEE9 199 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 GCDHQ92947 438 aaPredicted RBP13.15□□□□□ -0.3
CDCA3-207ENST00000538862 KTI12Q96EK9 354 aaPredicted RBP13.15□□□□□ -0.3
CDCA3-207ENST00000538862 NXF5Q9H1B4 397 aaKnown RBP13.15□□□□□ -0.3
CDCA3-207ENST00000538862 OR10A4Q9H209 315 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 NOX3Q9HBY0 568 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 LANCL2Q9NS86 450 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 TAS2R5Q9NYW4 299 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 IKZF2Q9UKS7 526 aa13.15□□□□□ -0.3
CDCA3-207ENST00000538862 IL5P05113 134 aa13.14□□□□□ -0.31
CDCA3-207ENST00000538862 IFNGR1P15260 489 aa13.14□□□□□ -0.31
CDCA3-207ENST00000538862 M6PRP20645 277 aa13.14□□□□□ -0.31
CDCA3-207ENST00000538862 CFPP27918 469 aa13.14□□□□□ -0.31
CDCA3-207ENST00000538862 ZNF81P51508 661 aa13.14□□□□□ -0.31
CDCA3-207ENST00000538862 BLVRAP53004 296 aa13.14□□□□□ -0.31
CDCA3-207ENST00000538862 ELOCQ15369 112 aa13.14□□□□□ -0.31
CDCA3-207ENST00000538862 Q6ZTK2 550 aa13.14□□□□□ -0.31
CDCA3-207ENST00000538862 SLC51BQ86UW2 128 aa13.14□□□□□ -0.31
CDCA3-207ENST00000538862 OR8H3Q8N146 312 aa13.14□□□□□ -0.31
CDCA3-207ENST00000538862 METTL27Q8N6F8 245 aaPredicted RBP13.14□□□□□ -0.31
CDCA3-207ENST00000538862 OR6N2Q8NGY6 317 aa13.14□□□□□ -0.31
CDCA3-207ENST00000538862 GPR148Q8TDV2 347 aa13.14□□□□□ -0.31
CDCA3-207ENST00000538862 TAAR8Q969N4 342 aa13.14□□□□□ -0.31
CDCA3-207ENST00000538862 INTS14Q96SY0 518 aa13.14□□□□□ -0.31
CDCA3-207ENST00000538862 METTL17Q9H7H0 456 aaPredicted RBP13.14□□□□□ -0.31
CDCA3-207ENST00000538862 BEX1Q9HBH7 125 aa13.14□□□□□ -0.31
CDCA3-207ENST00000538862 PDE7BQ9NP56 450 aa13.14□□□□□ -0.31
CDCA3-207ENST00000538862 EIF3KQ9UBQ5 218 aaKnown RBP13.14□□□□□ -0.31
CDCA3-207ENST00000538862 EPHA6Q9UF33 1036 aa13.14□□□□□ -0.31
CDCA3-207ENST00000538862 ACACBO00763 2458 aa13.14□□□□□ -0.31
CDCA3-207ENST00000538862 A0A087WV48 116 aa13.13□□□□□ -0.31
CDCA3-207ENST00000538862 TVP23AA6NH52 213 aa13.13□□□□□ -0.31
CDCA3-207ENST00000538862 ANXA2P2A6NMY6 339 aa13.13□□□□□ -0.31
CDCA3-207ENST00000538862 G3V3Q6 166 aa13.13□□□□□ -0.31
CDCA3-207ENST00000538862 ARPC1BO15143 372 aaKnown RBP13.13□□□□□ -0.31
CDCA3-207ENST00000538862 XRCC3O43542 346 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms