RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 A0A087WV62 115 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 P2RX6O15547 441 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 ZNF735P0CB33 412 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 CMPK1P30085 196 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 PEBP1P30086 187 aaKnown RBP16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 TLX1P31314 330 aaPredicted RBP16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 HABP2Q14520 560 aaPredicted RBP16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 ALG11Q2TAA5 492 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 LEG1Q6P5S2 330 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 IL34Q6ZMJ4 242 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 SLC16A13Q7RTY0 426 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 VN1R4Q7Z5H5 301 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 ZAR1Q86SH2 424 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 OR51A4Q8NGJ6 313 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 OR2G2Q8NGZ5 317 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 HCFC1R1Q9NWW0 138 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 DNAJB12Q9NXW2 375 aaKnown RBP16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 TINAGQ9UJW2 476 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 TBX21Q9UL17 535 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 A0A1B0GTH9 108 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 GABRA3P34903 492 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 PEA15Q15121 130 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 ZNF77Q15935 545 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 SLCO5A1Q9H2Y9 848 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 KCNK15Q9H427 330 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 LHX6Q9UPM6 363 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 SPTBP11277 2137 aa16.86■□□□□ 0.29
SFSWAP-207ENST00000538548 SLC17A2O00624 439 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 EIF1BO60739 113 aaKnown RBP16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 CYB5AP00167 134 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 CISD3P0C7P0 127 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 NFYBP25208 207 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 EIF1P41567 113 aaKnown RBP16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 NAAAQ02083 359 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 ZNF600Q6ZNG1 722 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 PARGQ86W56 976 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 BAP18Q8IXM2 172 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 ACKR4Q9NPB9 350 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 COLCA2A8K830 154 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 CCL16O15467 120 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 ALOX12BO75342 701 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 CXCL10P02778 98 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 CD74P04233 296 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 MAP3K8P41279 467 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 EMDP50402 254 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 SNRPNP63162 240 aaKnown RBP16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 ID2Q02363 134 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 GXYLT1Q4G148 440 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 LYG2Q86SG7 212 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 BPIFB2Q8N4F0 458 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 OR13C8Q8NGS7 320 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 WFIKKN2Q8TEU8 576 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 ZNF107Q9UII5 783 aaPredicted RBP16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 IKZF2Q9UKS7 526 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 NUP210LQ5VU65 1888 aa16.85■□□□□ 0.29
SFSWAP-207ENST00000538548 ZNF736B4DX44 427 aaPredicted RBP16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 SCAMP1O15126 338 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 LATO43561 262 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 LILRB3O75022 631 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 ZBTB25P24278 435 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 PAX6P26367 422 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 SLC25A1P53007 311 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 PJVKQ0ZLH3 352 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 ELAVL3Q14576 367 aaKnown RBP16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 HNRNPA1L2Q32P51 320 aaKnown RBP16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 KIRREL2Q6UWL6 708 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 MISPQ8IVT2 679 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 THRSPQ92748 146 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 ZNF346Q9UL40 294 aaKnown RBP16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 C5orf52A6NGY3 159 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 OR52A4PA6NMU1 304 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 CDKN2AP42771 156 aaKnown RBP16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 RASGEF1BQ0VAM2 473 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 AIMP2Q13155 320 aaKnown RBP16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 KCNAB1Q14722 419 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 SCGB2B2Q4G0G5 96 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 ABHD13Q7L211 337 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 CDC20BQ86Y33 519 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 ZSCAN1Q8NBB4 408 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 OR4K17Q8NGC6 315 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 SERINC2Q96SA4 455 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 GPX7Q96SL4 187 aaPredicted RBP16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 NRIP2Q9BQI9 281 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 LMAN2LQ9H0V9 348 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 TMEM231Q9H6L2 316 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 RCC2Q9P258 522 aaKnown RBP16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 DAPP1Q9UN19 280 aa16.84■□□□□ 0.29
SFSWAP-207ENST00000538548 TEX13DA0A0J9YY54 714 aaPredicted RBP16.83■□□□□ 0.29
SFSWAP-207ENST00000538548 EDDM13A0A1B0GTR0 161 aa16.83■□□□□ 0.29
SFSWAP-207ENST00000538548 LRRC72A6NJI9 287 aa16.83■□□□□ 0.29
SFSWAP-207ENST00000538548 UBE2CO00762 179 aa16.83■□□□□ 0.29
SFSWAP-207ENST00000538548 ZNF208O43345 1280 aa16.83■□□□□ 0.29
SFSWAP-207ENST00000538548 DNAJB6O75190 326 aa16.83■□□□□ 0.29
SFSWAP-207ENST00000538548 PGAM2P15259 253 aa16.83■□□□□ 0.29
SFSWAP-207ENST00000538548 PRPS1P60891 318 aa16.83■□□□□ 0.29
SFSWAP-207ENST00000538548 RPS4XP62701 263 aaKnown RBP16.83■□□□□ 0.29
SFSWAP-207ENST00000538548 PNLIPRP3Q17RR3 467 aa16.83■□□□□ 0.29
SFSWAP-207ENST00000538548 NKAPLQ5M9Q1 402 aa16.83■□□□□ 0.29
SFSWAP-207ENST00000538548 RBMS3Q6XE24 437 aaKnown RBP16.83■□□□□ 0.29
SFSWAP-207ENST00000538548 ZNF704Q6ZNC4 412 aaPredicted RBP16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms