RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 DHRS4L2Q6PKH6 230 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 SLC2A7Q6PXP3 512 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 MSANTD1Q6ZTZ1 278 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 DOK3Q7L591 496 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 SLC16A14Q7RTX9 510 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 KRT73Q86Y46 540 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 LRRC17Q8N6Y2 441 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 RBM15BQ8NDT2 890 aaKnown RBP11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 OR6X1Q8NH79 312 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 WFDC6Q9BQY6 131 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 PAIP1Q9H074 479 aaKnown RBP11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 LRMDAQ9H2I8 198 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 RAD21L1Q9H4I0 556 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 KCNK9Q9NPC2 374 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 LEF1Q9UJU2 399 aaPredicted RBP11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 PURGQ9UJV8 347 aaKnown RBP11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 NUP50Q9UKX7 468 aa11.87□□□□□ -0.51
SMARCA4-206ENST00000538456 IQCMA0A1B0GVH7 501 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 PLSCR5A0PG75 271 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 RGS16O15492 202 aaPredicted RBP11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 DHHO43323 396 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 TPST2O60704 377 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 PTHP01270 115 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 IGHV3-13P01766 116 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 QDPRP09417 244 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 BMP2P12643 396 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 AQP1P29972 269 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 RBMXP38159 391 aaKnown RBP11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 MPV17P39210 176 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 PLP2Q04941 152 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 MOGQ16653 247 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 GCNT6Q5T4J0 391 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 LRRC18Q8N456 261 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 DEFB108BQ8NET1 73 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 OR1J2Q8NGS2 313 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 IPCEF1Q8WWN9 437 aaPredicted RBP11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 GTF2H4Q92759 462 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 POP5Q969H6 163 aaKnown RBP11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 SLC25A28Q96A46 364 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 TMEM43Q9BTV4 400 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 SPATA5L1Q9BVQ7 753 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 ZMAT3Q9HA38 289 aaKnown RBP11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 MMP26Q9NRE1 261 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 SDR39U1Q9NRG7 319 aaPredicted RBP11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 ZIM2Q9NZV7 527 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 SLC13A4Q9UKG4 626 aa11.86□□□□□ -0.51
SMARCA4-206ENST00000538456 A0A0G2JK05 382 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 ZSCAN5BA6NJL1 495 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 RNF13O43567 381 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 FOXH1O75593 365 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 UBOX5O94941 541 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 MFN2O95140 757 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 MT-ATP6P00846 226 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 PGA4P0DJD7 388 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 PGA3P0DJD8 388 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 GCH1P30793 250 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 APLNRP35414 380 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 IL13RA1P78552 427 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 CDK6Q00534 326 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 HSF2Q03933 536 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 TMEM255AQ5JRV8 349 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 KLF17Q5JT82 389 aaPredicted RBP11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 FAM209AQ5JX71 171 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 REEP3Q6NUK4 255 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 LEG1Q6P5S2 330 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 RANBP3LQ86VV4 465 aaPredicted RBP11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 ZNF101Q8IZC7 436 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 C10orf111Q8N326 155 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 GOLGA6L1Q8N7Z2 621 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 GEMIN6Q8WXD5 167 aaKnown RBP11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 SLC25A44Q96H78 314 aaPredicted RBP11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 ZNF48Q96MX3 618 aaPredicted RBP11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 GPA33Q99795 319 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 CENPHQ9H3R5 247 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 SSU72Q9NP77 194 aaKnown RBP11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 DCAF16Q9NXF7 216 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 FAM53CQ9NYF3 392 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 PLEK2Q9NYT0 353 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 AUP1Q9Y679 476 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 WNK1Q9H4A3 2382 aa11.85□□□□□ -0.51
SMARCA4-206ENST00000538456 KPNA4O00629 521 aaPredicted RBP11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 CH25HO95992 272 aa11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 RNASE1P07998 156 aaKnown RBP11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 HOXB9P17482 250 aaPredicted RBP11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 MMP15P51511 669 aa11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 CLRN1P58418 232 aa11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 SLC3A1Q07837 685 aa11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 ZNF154Q13106 437 aa11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 TUSC1Q2TAM9 212 aa11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 SPRNQ5BIV9 151 aa11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 PABPC1L2AQ5JQF8 200 aa11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 THEM4Q5T1C6 240 aa11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 SWT1Q5T5J6 900 aaKnown RBP11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 DPPA2Q7Z7J5 298 aa11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 ANKRD42Q8N9B4 389 aa11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 CPEB3Q8NE35 698 aaKnown RBP11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 DCLRE1CQ96SD1 692 aaKnown RBP11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 ZNF347Q96SE7 839 aa11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 TMEM109Q9BVC6 243 aa11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 EGLN1Q9GZT9 426 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms