RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 SNX18Q96RF0 628 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 GFI1Q99684 422 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 MARVELD1Q9BSK0 173 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 DPCDQ9BVM2 203 aaPredicted RBP7.85□□□□□ -1.15
UBE3B-208ENST00000538070 IRF2BPLQ9H1B7 796 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 NPAP1Q9NZP6 1156 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 PPP4R1LQ9P1A2 415 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 ABRACLQ9P1F3 81 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 KLHL9Q9P2J3 617 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 PPIEQ9UNP9 301 aaKnown RBP7.85□□□□□ -1.15
UBE3B-208ENST00000538070 SIGLEC6O43699 453 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 LMX1BO60663 402 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 PNPP00491 289 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 IGLV3-19P01714 112 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 IGKV3-11P04433 115 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 AP2S1P53680 142 aaPredicted RBP7.85□□□□□ -1.15
UBE3B-208ENST00000538070 RPL27P61353 136 aaKnown RBP7.85□□□□□ -1.15
UBE3B-208ENST00000538070 FAM122BQ7Z309 247 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 DCXRQ7Z4W1 244 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 OR10H5Q8NGA6 315 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 OR2T35Q8NGX2 323 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 OR5B2Q96R09 309 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 GINS4Q9BRT9 223 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 METTL17Q9H7H0 456 aaPredicted RBP7.85□□□□□ -1.15
UBE3B-208ENST00000538070 RARRES3Q9UL19 164 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 DHDHQ9UQ10 334 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 PRSS37A4D1T9 235 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 TEX46H3BTG2 121 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 P2RY10O00398 339 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 NUDT21O43809 227 aaKnown RBP7.85□□□□□ -1.15
UBE3B-208ENST00000538070 CDAP32320 146 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 SLC6A8P48029 635 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 POLR2HP52434 150 aaKnown RBP7.85□□□□□ -1.15
UBE3B-208ENST00000538070 MFGE8Q08431 387 aaPredicted RBP7.85□□□□□ -1.15
UBE3B-208ENST00000538070 FOXF1Q12946 379 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 TAF13Q15543 124 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 ST3GAL2Q16842 350 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 UBE2NLQ5JXB2 153 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 ZNF782Q6ZMW2 699 aaPredicted RBP7.85□□□□□ -1.15
UBE3B-208ENST00000538070 TRILQ7L0X0 811 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 DUSP18Q8NEJ0 188 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 OR10G3Q8NGC4 313 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 CREB3L1Q96BA8 519 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 ZNF501Q96CX3 271 aaPredicted RBP7.85□□□□□ -1.15
UBE3B-208ENST00000538070 SHDQ96IW2 340 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 OR1F2PQ96R84 312 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 SLC22A11Q9NSA0 550 aa7.85□□□□□ -1.15
UBE3B-208ENST00000538070 A8MVM7 634 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 AIPO00170 330 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 MEN1O00255 615 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 GPRIN2O60269 458 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 UPK3AO75631 287 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 GTF2F2P13984 249 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 ALOX5APP20292 161 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 MNDAP41218 407 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 RAD52P43351 418 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 CAPZA2P47755 286 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 POU3F4P49335 361 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 P2RX1P51575 399 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 BIDP55957 195 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 INSM1Q01101 510 aaPredicted RBP7.84□□□□□ -1.15
UBE3B-208ENST00000538070 SCGB2B2Q4G0G5 96 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 YIF1BQ5BJH7 314 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 SLC35D3Q5M8T2 416 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 LCN10Q6JVE6 187 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 SLC18B1Q6NT16 456 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 ZNF574Q6ZN55 896 aaPredicted RBP7.84□□□□□ -1.15
UBE3B-208ENST00000538070 ZNF227Q86WZ6 799 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 PRSS35Q8N3Z0 413 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 OR11H7Q8NGC8 314 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 NPRL2Q8WTW4 380 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 SLC25A38Q96DW6 304 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 SLC25A44Q96H78 314 aaPredicted RBP7.84□□□□□ -1.15
UBE3B-208ENST00000538070 KCNJ15Q99712 375 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 DEFB126Q9BYW3 111 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 OCIAD1Q9NX40 245 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 TAS2R4Q9NYW5 299 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 CAMK2AQ9UQM7 478 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 CACNA1GO43497 2377 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 TRAV1-2A0A0B4J238 106 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 LOC101059948A0A1B0GTJ6 334 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 HRGP04196 525 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 S100A1P23297 94 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 HLA-DMAP28067 261 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 ERP29P30040 261 aaKnown RBP7.84□□□□□ -1.15
UBE3B-208ENST00000538070 GZMKP49863 264 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 RIDAP52758 137 aaKnown RBP7.84□□□□□ -1.15
UBE3B-208ENST00000538070 RPS4XP62701 263 aaKnown RBP7.84□□□□□ -1.15
UBE3B-208ENST00000538070 NKPD1Q17RQ9 610 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 RSPO4Q2I0M5 234 aaPredicted RBP7.84□□□□□ -1.15
UBE3B-208ENST00000538070 PLA1AQ53H76 456 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 LYSMD4Q5XG99 296 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 TMEM225Q6GV28 225 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 OR51A2Q8NGJ7 313 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 OR13C3Q8NGS6 347 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 LILRB4Q8NHJ6 448 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 MR1Q95460 341 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 ABHD6Q9BV23 337 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 NMNAT2Q9BZQ4 307 aa7.84□□□□□ -1.15
UBE3B-208ENST00000538070 SLC19A3Q9BZV2 496 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms