RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 G3V3Q6 166 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 PHYHO14832 338 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 NPC1O15118 1278 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 P2RX6O15547 441 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 SLC16A8O95907 504 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 ANKRD34CP0C6C1 535 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 SLC25A4P12235 298 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 ZNF35P13682 527 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 FOSL2P15408 326 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 MAKP20794 623 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 MPGP29372 298 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 CSKP41240 450 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 PGDP52209 483 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 ZNF134P52741 427 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 CAPZA1P52907 286 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 TBPL1P62380 186 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 CYCSP99999 105 aaKnown RBP5.97□□□□□ -1.45
USP28-202ENST00000535607 MAT1AQ00266 395 aaKnown RBP5.97□□□□□ -1.45
USP28-202ENST00000535607 B4GALNT1Q00973 533 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 E2F1Q01094 437 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 MC1RQ01726 317 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 HSPB3Q12988 150 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 FOXE3Q13461 319 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 TSTA3Q13630 321 aaPredicted RBP5.97□□□□□ -1.45
USP28-202ENST00000535607 PEA15Q15121 130 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 TOMM20Q15388 145 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 C4orf46Q504U0 113 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 TMEM35AQ53FP2 167 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 KHDRBS2Q5VWX1 349 aaKnown RBP5.97□□□□□ -1.45
USP28-202ENST00000535607 GLT8D1Q68CQ7 371 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 RAB12Q6IQ22 244 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 PLBD1Q6P4A8 553 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 ARHGAP11AQ6P4F7 1023 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 LCTLQ6UWM7 567 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 ACOT7LQ6ZUV0 252 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 PAQR7Q86WK9 346 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 C17orf64Q86WR6 236 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 IZUMO1Q8IYV9 350 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 NRSN1Q8IZ57 195 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 SAMD14Q8IZD0 417 aaPredicted RBP5.97□□□□□ -1.45
USP28-202ENST00000535607 APCDD1Q8J025 514 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 BEST3Q8N1M1 668 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 GTPBP8Q8N3Z3 284 aaPredicted RBP5.97□□□□□ -1.45
USP28-202ENST00000535607 ZNF561Q8N587 486 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 C15orf54Q8N8G6 183 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 ARL14EPQ8N8R7 260 aaPredicted RBP5.97□□□□□ -1.45
USP28-202ENST00000535607 OR6T1Q8NGN1 323 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 OR6N1Q8NGY5 312 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 STOML3Q8TAV4 291 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 LGALS14Q8TCE9 139 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 SUSD6Q92537 303 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 PIGKQ92643 395 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 GHSRQ92847 366 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 FGF13Q92913 245 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 SMARCD2Q92925 531 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 RAB8BQ92930 207 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 SMIM19Q96E16 107 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 RBM18Q96H35 190 aaKnown RBP5.97□□□□□ -1.45
USP28-202ENST00000535607 C4orf36Q96KX1 117 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 SLC22A12Q96S37 553 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 SEC11CQ9BY50 192 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 PLA2G12AQ9BZM1 189 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 SLCO5A1Q9H2Y9 848 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 RHBGQ9H310 441 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 OR51M1Q9H341 326 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 OPA3Q9H6K4 179 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 EXO5Q9H790 373 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 ISG20L2Q9H9L3 353 aaKnown RBP5.97□□□□□ -1.45
USP28-202ENST00000535607 UNKLQ9H9P5 680 aaKnown RBP5.97□□□□□ -1.45
USP28-202ENST00000535607 BEX1Q9HBH7 125 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 MYOZ1Q9NP98 299 aaPredicted RBP5.97□□□□□ -1.45
USP28-202ENST00000535607 CMC2Q9NRP2 79 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 ZNF107Q9UII5 783 aaPredicted RBP5.97□□□□□ -1.45
USP28-202ENST00000535607 CD207Q9UJ71 328 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 SLC35A3Q9Y2D2 325 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 V9GY05 133 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 NOTCH4Q99466 2003 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 PLXNB3Q9ULL4 1909 aa5.97□□□□□ -1.45
USP28-202ENST00000535607 CCDC88CQ9P219 2028 aa5.96□□□□□ -1.45
USP28-202ENST00000535607 COL4A3Q01955 1670 aa5.96□□□□□ -1.46
USP28-202ENST00000535607 TRBV2A0A0J9YWF9 115 aa5.96□□□□□ -1.46
USP28-202ENST00000535607 SLC5A10A0PJK1 596 aa5.96□□□□□ -1.46
USP28-202ENST00000535607 GGT3PA6NGU5 568 aa5.96□□□□□ -1.46
USP28-202ENST00000535607 FAM74A7A6NL05 159 aa5.96□□□□□ -1.46
USP28-202ENST00000535607 IFITM5A6NNB3 132 aa5.96□□□□□ -1.46
USP28-202ENST00000535607 LINC01565O15544 149 aa5.96□□□□□ -1.46
USP28-202ENST00000535607 EMC8O43402 210 aa5.96□□□□□ -1.46
USP28-202ENST00000535607 FMO6PO60774 539 aa5.96□□□□□ -1.46
USP28-202ENST00000535607 SH3BGRLO75368 114 aa5.96□□□□□ -1.46
USP28-202ENST00000535607 SIX6O95475 246 aa5.96□□□□□ -1.46
USP28-202ENST00000535607 C1orf105O95561 183 aa5.96□□□□□ -1.46
USP28-202ENST00000535607 CD160O95971 181 aa5.96□□□□□ -1.46
USP28-202ENST00000535607 CH25HO95992 272 aa5.96□□□□□ -1.46
USP28-202ENST00000535607 GBAP04062 536 aa5.96□□□□□ -1.46
USP28-202ENST00000535607 MELTFP08582 738 aa5.96□□□□□ -1.46
USP28-202ENST00000535607 SBK2P0C263 348 aa5.96□□□□□ -1.46
USP28-202ENST00000535607 TPT1P13693 172 aaKnown RBP5.96□□□□□ -1.46
USP28-202ENST00000535607 NPPBP16860 134 aa5.96□□□□□ -1.46
USP28-202ENST00000535607 ATF1P18846 271 aa5.96□□□□□ -1.46
USP28-202ENST00000535607 SRMP19623 302 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms