RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	ZSWIM7	Q19AV6	140 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ZFP69	Q49AA0	526 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TEX35	Q5T0J7	233 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SAXO2	Q658L1	398 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	RFLNA	Q6ZTI6	216 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	DEFB106A	Q8N104	65 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	PYROXD2	Q8N2H3	581 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	GVQW1	Q8N7I0	195 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	NUP37	Q8NFH4	326 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	OR10G7	Q8NGN6	311 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	OR6F1	Q8NGZ6	308 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TMEM37	Q8WXS4	190 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ALKBH3	Q96Q83	286 aa	Predicted RBP	3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	USP28	Q96RU2	1077 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	RIOK2	Q9BVS4	552 aa	Known RBP	3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SFXN3	Q9BWM7	321 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	OR2AG1	Q9H205	316 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ROPN1	Q9HAT0	212 aa	Predicted RBP	3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	LPAR2	Q9HBW0	351 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	WWOX	Q9NZC7	414 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ATXN10	Q9UBB4	475 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ZNF282	Q9UDV7	671 aa	Predicted RBP	3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	MIOX	Q9UGB7	285 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TRBV5-4	A0A0C4DH59	114 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442		B4DSR2	109 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ANGPTL7	O43827	346 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TSPAN2	O60636	221 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	HPR	P00739	348 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	FCER2	P06734	321 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	PAEP	P09466	180 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	MDH1	P40925	334 aa	Known RBP	3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	OR1D4	P47884	311 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	EFNA4	P52798	201 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CRYBA2	P53672	197 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	EMP2	P54851	167 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	YWHAE	P62258	255 aa	Known RBP	3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	RPS27A	P62979	156 aa	Known RBP	3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	PDZK1IP1	Q13113	114 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ZKSCAN8	Q15776	578 aa	Predicted RBP	3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	KNOP1	Q1ED39	458 aa	Known RBP	3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ADNP2	Q6IQ32	1131 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	STEAP1B	Q6NZ63	245 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	C16orf87	Q6PH81	154 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	RGS9BP	Q6ZS82	235 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CCDC65	Q8IXS2	484 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ZNF397	Q8NF99	534 aa	Predicted RBP	3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	OR4E2	Q8NGC2	313 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	FCGR1B	Q92637	280 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	NTAN1	Q96AB6	310 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ITCH	Q96J02	903 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	DUX3	Q96PT4	197 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TTTY12	Q9BZ98	90 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CHRNA10	Q9GZZ6	450 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	DPH5	Q9H2P9	285 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	KIR3DX1	Q9H7L2	352 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TRIM45	Q9H8W5	580 aa	Predicted RBP	3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	FAM60A	Q9NP50	221 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ADAP2	Q9NPF8	381 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	DEPP	Q9NTK1	212 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	IMP3	Q9NV31	184 aa	Known RBP	3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	FAIM	Q9NVQ4	179 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TEX10	Q9NXF1	929 aa	Predicted RBP	3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	PRODH2	Q9UF12	536 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SLC6A5	Q9Y345	797 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ZNF175	Q9Y473	711 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	DNAH6	Q9C0G6	4158 aa		3.56	□□□□□ -1.84
ECHDC1-223	ENST00000534442	IGLV3-12	A0A075B6K2	115 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TRGV5	A0A0B4J1U4	118 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	IQCM	A0A1B0GVH7	501 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442		A0A1B0GW55	424 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	C2orf74	A8MZ97	194 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	NDUFA7	O95182	113 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	AK1	P00568	194 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	DUX4L2	P0CJ85	424 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	DUX4L3	P0CJ86	424 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	DUX4L5	P0CJ88	424 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	DUX4L6	P0CJ89	424 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	DUX4L7	P0CJ90	424 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	POU2F1	P14859	743 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	FCGR2B	P31994	310 aa	Predicted RBP	3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	FCGR2C	P31995	323 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	RPL4	P36578	427 aa	Known RBP	3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ACAA2	P42765	397 aa	Known RBP	3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	RGR	P47804	291 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	GCLM	P48507	274 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CRIP2	P52943	208 aa	Predicted RBP	3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	GSC	P56915	257 aa	Predicted RBP	3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ERVK-16	P61578	105 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	AP1S1	P61966	158 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CDKL1	Q00532	357 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	NAAA	Q02083	359 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	XRCC4	Q13426	336 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	KIAA0141	Q14154	515 aa	Predicted RBP	3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	RFTN1	Q14699	578 aa	Predicted RBP	3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SLC10A1	Q14973	349 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ADPRM	Q3LIE5	342 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	C1orf220	Q5T0J3	134 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	LRRC66	Q68CR7	880 aa		3.55	□□□□□ -1.84
ECHDC1-223	ENST00000534442	C11orf71	Q6IPW1	123 aa		3.55	□□□□□ -1.84

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