RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 SLC36A2Q495M3 483 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 TMEM255AQ5JRV8 349 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 FAM209AQ5JX71 171 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 CEP85LQ5SZL2 805 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 SPATA46Q5T0L3 261 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 GCNT6Q5T4J0 391 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 C10orf111Q8N326 155 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 RBM15BQ8NDT2 890 aaKnown RBP12.65□□□□□ -0.38
CTSB-230ENST00000534149 DEFB108BQ8NET1 73 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 OR1J2Q8NGS2 313 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 ST7LQ8TDW4 575 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 POP5Q969H6 163 aaKnown RBP12.65□□□□□ -0.38
CTSB-230ENST00000534149 ZNF48Q96MX3 618 aaPredicted RBP12.65□□□□□ -0.38
CTSB-230ENST00000534149 TMEM109Q9BVC6 243 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 SPATA5L1Q9BVQ7 753 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 ZMAT3Q9HA38 289 aaKnown RBP12.65□□□□□ -0.38
CTSB-230ENST00000534149 MMP26Q9NRE1 261 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 SDR39U1Q9NRG7 319 aaPredicted RBP12.65□□□□□ -0.38
CTSB-230ENST00000534149 NUP50Q9UKX7 468 aa12.65□□□□□ -0.38
CTSB-230ENST00000534149 IQCMA0A1B0GVH7 501 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 RNF13O43567 381 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 FOXH1O75593 365 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 UBOX5O94941 541 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 PTHP01270 115 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 QDPRP09417 244 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 PGA4P0DJD7 388 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 PGA3P0DJD8 388 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 CCNOP22674 350 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 MPV17P39210 176 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 ATP4BP51164 291 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 IL13RA1P78552 427 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 CDK6Q00534 326 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 PLP2Q04941 152 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 KLF17Q5JT82 389 aaPredicted RBP12.64□□□□□ -0.39
CTSB-230ENST00000534149 REEP3Q6NUK4 255 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 DPPA2Q7Z7J5 298 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 KRT73Q86Y46 540 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 AENQ8WTP8 325 aaKnown RBP12.64□□□□□ -0.39
CTSB-230ENST00000534149 IPCEF1Q8WWN9 437 aaPredicted RBP12.64□□□□□ -0.39
CTSB-230ENST00000534149 ZBTB9Q96C00 473 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 SLC25A44Q96H78 314 aaPredicted RBP12.64□□□□□ -0.39
CTSB-230ENST00000534149 LRMDAQ9H2I8 198 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 KCNK9Q9NPC2 374 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 TAS2R5Q9NYW4 299 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 SLC25A37Q9NYZ2 338 aa12.64□□□□□ -0.39
CTSB-230ENST00000534149 PURGQ9UJV8 347 aaKnown RBP12.64□□□□□ -0.39
CTSB-230ENST00000534149 PPIAL4EA0A075B759 164 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 PPIAL4CA0A0B4J2A2 164 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 A0A0G2JK05 382 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 ZSCAN5BA6NJL1 495 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 PPIAL4DF5H284 164 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 CH25HO95992 272 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 RNASE1P07998 156 aaKnown RBP12.63□□□□□ -0.39
CTSB-230ENST00000534149 PPIAL4FP0DN26 164 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 AQP1P29972 269 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 APLNRP35414 380 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 RBMXP38159 391 aaKnown RBP12.63□□□□□ -0.39
CTSB-230ENST00000534149 MMP15P51511 669 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 HSF2Q03933 536 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 SLC3A1Q07837 685 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 SPRNQ5BIV9 151 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 THEM4Q5T1C6 240 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 SWT1Q5T5J6 900 aaKnown RBP12.63□□□□□ -0.39
CTSB-230ENST00000534149 RANBP3LQ86VV4 465 aaPredicted RBP12.63□□□□□ -0.39
CTSB-230ENST00000534149 MSRB3Q8IXL7 192 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 ZNF101Q8IZC7 436 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 LRRC18Q8N456 261 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 GOLGA6L1Q8N7Z2 621 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 CPEB3Q8NE35 698 aaKnown RBP12.63□□□□□ -0.39
CTSB-230ENST00000534149 GEMIN6Q8WXD5 167 aaKnown RBP12.63□□□□□ -0.39
CTSB-230ENST00000534149 TRIM44Q96DX7 344 aaPredicted RBP12.63□□□□□ -0.39
CTSB-230ENST00000534149 MAELQ96JY0 434 aaKnown RBP12.63□□□□□ -0.39
CTSB-230ENST00000534149 GPA33Q99795 319 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 DCAF16Q9NXF7 216 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 PLEK2Q9NYT0 353 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 SLC13A4Q9UKG4 626 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 TRIM33Q9UPN9 1127 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 AUP1Q9Y679 476 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 WNK1Q9H4A3 2382 aa12.63□□□□□ -0.39
CTSB-230ENST00000534149 PLSCR5A0PG75 271 aa12.62□□□□□ -0.39
CTSB-230ENST00000534149 POM121CA8CG34 1229 aa12.62□□□□□ -0.39
CTSB-230ENST00000534149 TRAPPC2LH3BP13 241 aa12.62□□□□□ -0.39
CTSB-230ENST00000534149 M0R3H8 397 aa12.62□□□□□ -0.39
CTSB-230ENST00000534149 UBDO15205 165 aa12.62□□□□□ -0.39
CTSB-230ENST00000534149 MMP7P09237 267 aaPredicted RBP12.62□□□□□ -0.39
CTSB-230ENST00000534149 GCH1P30793 250 aa12.62□□□□□ -0.39
CTSB-230ENST00000534149 WNT5AP41221 380 aa12.62□□□□□ -0.39
CTSB-230ENST00000534149 CLRN1P58418 232 aa12.62□□□□□ -0.39
CTSB-230ENST00000534149 ZNF154Q13106 437 aa12.62□□□□□ -0.39
CTSB-230ENST00000534149 SCARB2Q14108 478 aa12.62□□□□□ -0.39
CTSB-230ENST00000534149 ZNF74Q16587 644 aa12.62□□□□□ -0.39
CTSB-230ENST00000534149 ZNF718Q3SXZ3 478 aa12.62□□□□□ -0.39
CTSB-230ENST00000534149 PABPC1L2AQ5JQF8 200 aa12.62□□□□□ -0.39
CTSB-230ENST00000534149 HHATQ5VTY9 493 aa12.62□□□□□ -0.39
CTSB-230ENST00000534149 MAVSQ7Z434 540 aa12.62□□□□□ -0.39
CTSB-230ENST00000534149 ANKRD42Q8N9B4 389 aa12.62□□□□□ -0.39
CTSB-230ENST00000534149 MCHR2Q969V1 340 aa12.62□□□□□ -0.39
CTSB-230ENST00000534149 SLC25A28Q96A46 364 aa12.62□□□□□ -0.39
CTSB-230ENST00000534149 OR52B2Q96RD2 323 aa12.62□□□□□ -0.39
CTSB-230ENST00000534149 ZNF347Q96SE7 839 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms