RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 EMC6Q9BV81 110 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 C1QTNF3Q9BXJ4 246 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 OR2J1Q9GZK6 312 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 NPFFR1Q9GZQ6 430 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 PCDHAC1Q9H158 963 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 MAB21L2Q9Y586 359 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 DUXAA6NLW8 204 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 H0YHG0 523 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 H3BUX3 64 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 SURF4O15260 269 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 TIMM8AO60220 97 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-215ENST00000533818 PEX14O75381 377 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 SUPT7LO94864 414 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 CYB5R3P00387 301 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-215ENST00000533818 UQCRBP14927 111 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 APLNRP35414 380 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 GATA4P43694 442 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 ANXA11P50995 505 aaKnown RBP8.62□□□□□ -1.03
CSDE1-215ENST00000533818 HABP2Q14520 560 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-215ENST00000533818 GSTA3Q16772 222 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 SMU1Q2TAY7 513 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 ZNF404Q494X3 552 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 UNQ6126/PRO20091Q6UXV3 157 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 C16orf62Q7Z3J2 963 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 ZNF101Q8IZC7 436 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 OR6N1Q8NGY5 312 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 MFSD8Q8NHS3 518 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 WIPF2Q8TF74 440 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-215ENST00000533818 DCTN5Q9BTE1 182 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 GCM1Q9NP62 436 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 RAB18Q9NP72 206 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 EIF3KQ9UBQ5 218 aaKnown RBP8.62□□□□□ -1.03
CSDE1-215ENST00000533818 IL19Q9UHD0 177 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 TBK1Q9UHD2 729 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 WDR45Q9Y484 360 aa8.62□□□□□ -1.03
CSDE1-215ENST00000533818 HUWE1Q7Z6Z7 4374 aaKnown RBP8.61□□□□□ -1.03
CSDE1-215ENST00000533818 CFAP73A6NFT4 308 aa8.61□□□□□ -1.03
CSDE1-215ENST00000533818 A8MT66 165 aa8.61□□□□□ -1.03
CSDE1-215ENST00000533818 FTCDNL1E5RQL4 147 aa8.61□□□□□ -1.03
CSDE1-215ENST00000533818 FAAHO00519 579 aa8.61□□□□□ -1.03
CSDE1-215ENST00000533818 ENTPD5O75356 428 aa8.61□□□□□ -1.03
CSDE1-215ENST00000533818 SEC22BO75396 215 aa8.61□□□□□ -1.03
CSDE1-215ENST00000533818 AHSA1O95433 338 aa8.61□□□□□ -1.03
CSDE1-215ENST00000533818 ENO1P06733 434 aaKnown RBP8.61□□□□□ -1.03
CSDE1-215ENST00000533818 MATN1P21941 496 aa8.61□□□□□ -1.03
CSDE1-215ENST00000533818 MAPK1P28482 360 aa8.61□□□□□ -1.03
CSDE1-215ENST00000533818 CD83Q01151 205 aa8.61□□□□□ -1.03
CSDE1-215ENST00000533818 TYW3Q6IPR3 259 aaKnown RBP8.61□□□□□ -1.03
CSDE1-215ENST00000533818 LHFPL2Q6ZUX7 228 aa8.61□□□□□ -1.03
CSDE1-215ENST00000533818 ZER1Q7Z7L7 766 aa8.61□□□□□ -1.03
CSDE1-215ENST00000533818 OR5AK3PQ8NH89 298 aa8.61□□□□□ -1.03
CSDE1-215ENST00000533818 CLHC1Q8NHS4 586 aa8.61□□□□□ -1.03
CSDE1-215ENST00000533818 ZNF420Q8TAQ5 688 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-215ENST00000533818 TSSK3Q96PN8 268 aa8.61□□□□□ -1.03
CSDE1-215ENST00000533818 OR2V2Q96R30 315 aa8.61□□□□□ -1.03
CSDE1-215ENST00000533818 OR5M11Q96RB7 305 aa8.61□□□□□ -1.03
CSDE1-215ENST00000533818 NKX3-1Q99801 234 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-215ENST00000533818 LOC102725191A0A1B0GVB3 256 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 A0A1W2PRD5 423 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 A0A1W2PRF3 423 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 A0A1W2PRM7 423 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 PGRMC1O00264 195 aaKnown RBP8.6□□□□□ -1.03
CSDE1-215ENST00000533818 NPFFO15130 113 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 TP73O15350 636 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 RAMP3O60896 148 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 NPIPB7O75200 414 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 THY1P04216 161 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 EEF1B2P24534 225 aaKnown RBP8.6□□□□□ -1.03
CSDE1-215ENST00000533818 WNT5AP41221 380 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 RPS5P46782 204 aaKnown RBP8.6□□□□□ -1.03
CSDE1-215ENST00000533818 NPY4RP50391 375 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 UNC50Q53HI1 259 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 FAM201AQ5SY85 155 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 DCDC5Q6ZRR9 648 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 VMO1Q7Z5L0 202 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 DPPA2Q7Z7J5 298 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 SBSPONQ8IVN8 264 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 UEVLDQ8IX04 471 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 LINC00482Q8N8I6 264 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 RBM15BQ8NDT2 890 aaKnown RBP8.6□□□□□ -1.03
CSDE1-215ENST00000533818 HIPK4Q8NE63 616 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 PSMA8Q8TAA3 256 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 SFXN5Q8TD22 340 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 OR5P2Q8WZ92 322 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 MOAP1Q96BY2 351 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 ISOC1Q96CN7 298 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 MAELQ96JY0 434 aaKnown RBP8.6□□□□□ -1.03
CSDE1-215ENST00000533818 SSX3Q99909 188 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 MCRIP2Q9BUT9 160 aaKnown RBP8.6□□□□□ -1.03
CSDE1-215ENST00000533818 FAM234AQ9H0X4 552 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 POLE3Q9NRF9 147 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 BAIAP2L1Q9UHR4 511 aa8.6□□□□□ -1.03
CSDE1-215ENST00000533818 NUP214P35658 2090 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-215ENST00000533818 A0A1B0GW55 424 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 ZNF726A6NNF4 738 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 FBP2O00757 339 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 AIM2O14862 343 aa8.59□□□□□ -1.03
CSDE1-215ENST00000533818 SEC31AO94979 1220 aaKnown RBP8.59□□□□□ -1.03
CSDE1-215ENST00000533818 FARS2O95363 451 aaKnown RBP8.59□□□□□ -1.03
CSDE1-215ENST00000533818 FSTL3O95633 263 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms