RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 DCTN2Q13561 401 aaKnown RBP7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 VMACQ2NL98 169 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 GTDC1Q4AE62 458 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 MIDNQ504T8 468 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 MRPL2Q5T653 305 aaKnown RBP7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 ANXA8L1Q5VT79 327 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 SHQ1Q6PI26 577 aaKnown RBP7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 TBPL2Q6SJ96 375 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 KLHL24Q6TFL4 600 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 DEF8Q6ZN54 512 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 C1orf229Q6ZS94 237 aaPredicted RBP7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 CREB3L2Q70SY1 520 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 GPAT4Q86UL3 456 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 CLVS1Q8IUQ0 354 aaPredicted RBP7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 FAM86B1Q8N7N1 296 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 ZNF540Q8NDQ6 660 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 SETD9Q8NE22 299 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 NUP37Q8NFH4 326 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 OR13F1Q8NGS4 319 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 FBLIM1Q8WUP2 373 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 LZICQ8WZA0 190 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 DDIT4LQ96D03 193 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 NRBF2Q96F24 287 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 PYURFQ96I23 114 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 BCL7BQ9BQE9 202 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 SF3B5Q9BWJ5 86 aaKnown RBP7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 TOR3AQ9H497 397 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 PIF1Q9H611 641 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 ZNF442Q9H7R0 627 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 NOX3Q9HBY0 568 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 RLIMQ9NVW2 624 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 BTNL2Q9UIR0 455 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 ORC6Q9Y5N6 252 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 V9GYQ6 96 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 CMYA5Q8N3K9 4069 aa7.93□□□□□ -1.14
CHMP4A-205ENST00000531158 SH3PXD2BA1X283 911 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 FTCDNL1E5RQL4 147 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 ZNF587BE7ETH6 402 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 GNGT2O14610 69 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 MRPS14O60783 128 aaKnown RBP7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 ZNF432O94892 652 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 CPSF4O95639 269 aaKnown RBP7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 CCDC159P0C7I6 412 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 GKN3PP0CG01 181 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 PRG2P13727 222 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 NPR2P20594 1047 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 CRHBPP24387 322 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 SRP14P37108 136 aaKnown RBP7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 CDKN2CP42773 168 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 KHKP50053 298 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 MVDP53602 400 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 TMBIM6P55061 237 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 RAB39AQ14964 217 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 C3orf36Q3SXR2 165 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 GPAT3Q53EU6 434 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 ELFN2Q5R3F8 820 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 COX20Q5RI15 118 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 ZNF691Q5VV52 312 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 ZNF836Q6ZNA1 936 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 KCTD8Q6ZWB6 473 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 PIWIL3Q7Z3Z3 882 aaKnown RBP7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 RNF130Q86XS8 419 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 CROCCP3Q8IVE0 287 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 WDFY1Q8IWB7 410 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 KDM8Q8N371 416 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 FAM169BQ8N8A8 192 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 PMM1Q92871 262 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 TMIGD2Q96BF3 282 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 C12orf43Q96C57 262 aaKnown RBP7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 NAA11Q9BSU3 229 aaPredicted RBP7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 PTDSS2Q9BVG9 487 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 RSPO3Q9BXY4 272 aaPredicted RBP7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 RACGAP1Q9H0H5 632 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 RAB1BQ9H0U4 201 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 TPK1Q9H3S4 243 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 METTL17Q9H7H0 456 aaPredicted RBP7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 SLC6A13Q9NSD5 602 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 FAM118AQ9NWS6 357 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 ADPRHL2Q9NX46 363 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 B3GAT1Q9P2W7 334 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 DSPPQ9NZW4 1301 aa7.92□□□□□ -1.14
CHMP4A-205ENST00000531158 CDHR4A6H8M9 788 aa7.91□□□□□ -1.14
CHMP4A-205ENST00000531158 H3BMQ9 156 aa7.91□□□□□ -1.14
CHMP4A-205ENST00000531158 CLIC1O00299 241 aa7.91□□□□□ -1.14
CHMP4A-205ENST00000531158 E2F6O75461 281 aa7.91□□□□□ -1.14
CHMP4A-205ENST00000531158 SEC14L2O76054 403 aa7.91□□□□□ -1.14
CHMP4A-205ENST00000531158 CLIC3O95833 236 aa7.91□□□□□ -1.14
CHMP4A-205ENST00000531158 AGR2O95994 175 aa7.91□□□□□ -1.14
CHMP4A-205ENST00000531158 AVPP01185 164 aa7.91□□□□□ -1.14
CHMP4A-205ENST00000531158 HPXP02790 462 aa7.91□□□□□ -1.14
CHMP4A-205ENST00000531158 ADRA2AP08913 450 aa7.91□□□□□ -1.14
CHMP4A-205ENST00000531158 IFNGR1P15260 489 aa7.91□□□□□ -1.14
CHMP4A-205ENST00000531158 PCGF2P35227 344 aa7.91□□□□□ -1.14
CHMP4A-205ENST00000531158 ARHGDIAP52565 204 aa7.91□□□□□ -1.14
CHMP4A-205ENST00000531158 CXCR4P61073 352 aa7.91□□□□□ -1.14
CHMP4A-205ENST00000531158 ARF1P84077 181 aaKnown RBP7.91□□□□□ -1.14
CHMP4A-205ENST00000531158 EGR4Q05215 589 aa7.91□□□□□ -1.14
CHMP4A-205ENST00000531158 PHYHD1Q5SRE7 291 aa7.91□□□□□ -1.14
CHMP4A-205ENST00000531158 ATAD3BQ5T9A4 648 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms