RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 LRRK1Q38SD2 2015 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 M0QZ92 97 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 M0R143 59 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 EIF1AYO14602 144 aaKnown RBP7.4□□□□□ -1.22
CSDE1-214ENST00000530886 GTF2F2P13984 249 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 LMO1P25800 156 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 PYCR1P32322 319 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 MAP3K8P41279 467 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 EIF1AXP47813 144 aaKnown RBP7.4□□□□□ -1.22
CSDE1-214ENST00000530886 SOX8P57073 446 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 SIRPAP78324 504 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 ARF5P84085 180 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 GAS6Q14393 721 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 RAB35Q15286 201 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 UBE2V2Q15819 145 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 OR2A2Q6IF42 318 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 MED27Q6P2C8 311 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 FAM151BQ6UXP7 276 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 LANCL3Q6ZV70 420 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 GRASPQ7Z6J2 395 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-214ENST00000530886 BIVMQ86UB2 503 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 GKN2Q86XP6 184 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 ETFBKMTQ8IXQ9 262 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 IFI44Q8TCB0 444 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 GPX8Q8TED1 209 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 NOX4Q9NPH5 578 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 CMC2Q9NRP2 79 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 SIRT3Q9NTG7 399 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-214ENST00000530886 STEAP1Q9UHE8 339 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 TCFL5Q9UL49 500 aa7.4□□□□□ -1.22
CSDE1-214ENST00000530886 PIN4Q9Y237 131 aaKnown RBP7.4□□□□□ -1.22
CSDE1-214ENST00000530886 TCF20Q9UGU0 1960 aaKnown RBP7.4□□□□□ -1.23
CSDE1-214ENST00000530886 NSA2O95478 260 aaKnown RBP7.4□□□□□ -1.23
CSDE1-214ENST00000530886 TBX18O95935 607 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 ZGLP1P0C6A0 271 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 ZNF735P0CB33 412 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 PTHLHP12272 177 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 CX3CR1P49238 355 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 ZNF84P51523 738 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 TAS2R41P59536 307 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 SKP1P63208 163 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 RPP30P78346 268 aaKnown RBP7.4□□□□□ -1.23
CSDE1-214ENST00000530886 CYCSP99999 105 aaKnown RBP7.4□□□□□ -1.23
CSDE1-214ENST00000530886 TWF1Q12792 350 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 GGTLC2Q14390 218 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 ZNHIT3Q15649 155 aaPredicted RBP7.4□□□□□ -1.23
CSDE1-214ENST00000530886 ZNF697Q5TEC3 545 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 POMZP3Q6PJE2 187 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 GABRG1Q8N1C3 465 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 OR7G2Q8NG99 324 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 SUN3Q8TAQ9 357 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 MR1Q95460 341 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 NEIL2Q969S2 332 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 PELI1Q96FA3 418 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 WDR92Q96MX6 357 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 TBX5Q99593 518 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 GAL3ST2Q9H3Q3 398 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 DNAJB11Q9UBS4 358 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 FBXO7Q9Y3I1 522 aa7.4□□□□□ -1.23
CSDE1-214ENST00000530886 A0A0G2JLL6 359 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-214ENST00000530886 OR2C1O95371 312 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 IL18BPO95998 194 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 SNCAP37840 140 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 TPGS1Q6ZTW0 290 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 PRRT2Q7Z6L0 340 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-214ENST00000530886 C9orf40Q8IXQ3 194 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 MMP21Q8N119 569 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 ADGRG7Q96K78 797 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 PACRGQ96M98 296 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-214ENST00000530886 SLCO5A1Q9H2Y9 848 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 POT1Q9NUX5 634 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 KCNG2Q9UJ96 466 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 HTTP42858 3142 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 A0A1W2PPE2 198 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 TP53I11O14683 189 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 SNAI1O95863 264 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-214ENST00000530886 WNT11O96014 354 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 CD3DP04234 171 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 GZMBP10144 247 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 DAOP14920 347 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 PBLDP30039 288 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-214ENST00000530886 PPP2R1BP30154 601 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 CCR4P51679 360 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 SGSHP51688 502 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 TAS2R50P59544 299 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 RPS26P62854 115 aaKnown RBP7.39□□□□□ -1.23
CSDE1-214ENST00000530886 INSM1Q01101 510 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-214ENST00000530886 MEF2DQ14814 521 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 NR0B2Q15466 257 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 SCGB2B2Q4G0G5 96 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 ADGRF1Q5T601 910 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 PRAMEF17Q5VTA0 474 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 ZDHHC22Q8N966 263 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 ZSCAN4Q8NAM6 433 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-214ENST00000530886 OR5AK2Q8NH90 309 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 DNAJB3Q8WWF6 145 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 SMPDL3AQ92484 453 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 HCAR1Q9BXC0 346 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 SLC5A7Q9GZV3 580 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 SLC25A31Q9H0C2 315 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms