RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 HSPD1P10809 573 aaKnown RBP4.63□□□□□ -1.67
PCF11-202ENST00000528336 CD1CP29017 333 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 RGRP47804 291 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 TGM4P49221 684 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 PGFP49763 221 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 KRTAP10-5P60370 271 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 LCN2P80188 198 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 CDKL1Q00532 357 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 KLRB1Q12918 225 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 GRB7Q14451 532 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 PPP1R3AQ16821 1122 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 ZNF691Q5VV52 312 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 FAM151BQ6UXP7 276 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 TMEM64Q6YI46 380 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 MOB2Q70IA6 237 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 PAGE2Q7Z2X7 111 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 SLC25A42Q86VD7 318 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 MARCH9Q86YJ5 346 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 APRG1Q8IVJ8 170 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 CCDC50Q8IVM0 306 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 CLEC4FQ8N1N0 589 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 ARHGAP18Q8N392 663 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 POM121L12Q8N7R1 296 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 CCDC197Q8NCU1 140 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 GPR148Q8TDV2 347 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 FAM131CQ96AQ9 280 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 JSRP1Q96MG2 331 aaPredicted RBP4.63□□□□□ -1.67
PCF11-202ENST00000528336 ATF6BQ99941 703 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 NAT9Q9BTE0 207 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 CHID1Q9BWS9 393 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 SLC38A1Q9H2H9 487 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 METTL8Q9H825 291 aaKnown RBP4.63□□□□□ -1.67
PCF11-202ENST00000528336 UGT1A10Q9HAW8 530 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 SLC38A10Q9HBR0 1119 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 UBE2TQ9NPD8 197 aaPredicted RBP4.63□□□□□ -1.67
PCF11-202ENST00000528336 PRSS16Q9NQE7 514 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 SENP1Q9P0U3 644 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 ZNF319Q9P2F9 582 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 MRM2Q9UI43 246 aaKnown RBP4.63□□□□□ -1.67
PCF11-202ENST00000528336 MYH7P12883 1935 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 ROBO3Q96MS0 1386 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 A0A0A6YYH2 397 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 PRSS37A4D1T9 235 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 OR6C70A6NIJ9 312 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 A6NJ64 397 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 KLRC4-KLRK1H3BQV0 150 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 TOX3O15405 576 aaPredicted RBP4.62□□□□□ -1.67
PCF11-202ENST00000528336 N4BP1O75113 896 aaKnown RBP4.62□□□□□ -1.67
PCF11-202ENST00000528336 RPP14O95059 124 aaKnown RBP4.62□□□□□ -1.67
PCF11-202ENST00000528336 NSA2O95478 260 aaKnown RBP4.62□□□□□ -1.67
PCF11-202ENST00000528336 ETHE1O95571 254 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 H2BFMP0C1H6 154 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 OCMP0CE72 109 aaPredicted RBP4.62□□□□□ -1.67
PCF11-202ENST00000528336 SMIM10L1P0DMW3 83 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 MLNP12872 115 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 FCGR2CP31995 323 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 MRPL19P49406 292 aaKnown RBP4.62□□□□□ -1.67
PCF11-202ENST00000528336 STK19P49842 368 aaPredicted RBP4.62□□□□□ -1.67
PCF11-202ENST00000528336 PSMD4P55036 377 aaKnown RBP4.62□□□□□ -1.67
PCF11-202ENST00000528336 PEX3P56589 373 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 OSTNP61366 133 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 SRPXP78539 464 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 KLF5Q13887 457 aaPredicted RBP4.62□□□□□ -1.67
PCF11-202ENST00000528336 VGLL4Q14135 290 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 ATXN7L3Q14CW9 347 aaPredicted RBP4.62□□□□□ -1.67
PCF11-202ENST00000528336 ZNF77Q15935 545 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 DNAL1Q4LDG9 190 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 C5orf47Q569G3 176 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 CLVS2Q5SYC1 327 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 ZNF658Q5TYW1 1059 aaPredicted RBP4.62□□□□□ -1.67
PCF11-202ENST00000528336 LRRC74BQ6ZQY2 392 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 Q7L0L9 218 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 ASRGL1Q7L266 308 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 FAM122BQ7Z309 247 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 ITIH5Q86UX2 942 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 CACUL1Q86Y37 369 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 SYS1Q8N2H4 156 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 TTLQ8NG68 377 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 OR4A4PQ8NGN8 299 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 ENKURQ8TC29 256 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 PIH1D2Q8WWB5 315 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 CAPSLQ8WWF8 208 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 NUS1Q96E22 293 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 DUS3LQ96G46 650 aaKnown RBP4.62□□□□□ -1.67
PCF11-202ENST00000528336 SMIM10Q96HG1 83 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 TNFRSF13CQ96RJ3 184 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 GPR174Q9BXC1 333 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 MAP1LC3CQ9BXW4 147 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 NEUROG2Q9H2A3 272 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 INPP5EQ9NRR6 644 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 GPATCH2LQ9NWQ4 482 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 MYEF2Q9P2K5 600 aaKnown RBP4.62□□□□□ -1.67
PCF11-202ENST00000528336 ANAPC7Q9UJX3 599 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 IKZF3Q9UKT9 509 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 DDX60LQ5H9U9 1706 aaKnown RBP4.62□□□□□ -1.67
PCF11-202ENST00000528336 FOCADQ5VW36 1801 aa4.62□□□□□ -1.67
PCF11-202ENST00000528336 CEP350Q5VT06 3117 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 NAV1Q8NEY1 1877 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 TRGV8A0A0C4DH27 118 aa4.61□□□□□ -1.67
PCF11-202ENST00000528336 A0A1B0GW15 77 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms