RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 OR6S1Q8NH40 331 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 KCNG3Q8TAE7 436 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 BCL7CQ8WUZ0 217 aaPredicted RBP6.7□□□□□ -1.34
CTNND1-216ENST00000527467 NXF2Q9GZY0 626 aaKnown RBP6.7□□□□□ -1.34
CTNND1-216ENST00000527467 C20orf85Q9H1P6 137 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 TMEM231Q9H6L2 316 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 HES4Q9HCC6 221 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 hCG_1809904A0A1W2PP81 198 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 A0A1W2PPE2 198 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 A0A1W2PR64 198 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 A0A1W2PRV1 198 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 C2CD4DB7Z1M9 353 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 GABRPO00591 440 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 CRHP06850 196 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 UBL4AP11441 157 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 GM2AP17900 193 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 MMP11P24347 488 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 HTR2CP28335 458 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 RNF144AP50876 292 aaPredicted RBP6.7□□□□□ -1.34
CTNND1-216ENST00000527467 STC1P52823 247 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 BPIFB3P59826 476 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 SNRPEP62304 92 aaKnown RBP6.7□□□□□ -1.34
CTNND1-216ENST00000527467 DOC2BQ14184 412 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 LTB4RQ15722 352 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 ADIPOQQ15848 244 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 SYT6Q5T7P8 510 aaPredicted RBP6.7□□□□□ -1.34
CTNND1-216ENST00000527467 ACOT7LQ6ZUV0 252 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 OR52R1Q8NGF1 315 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 SLC35B2Q8TB61 432 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 RXFP4Q8TDU9 374 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 ADAMTS18Q8TE60 1221 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 CREB3L4Q8TEY5 395 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 TMED6Q8WW62 240 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 NDRG1Q92597 394 aaKnown RBP6.7□□□□□ -1.34
CTNND1-216ENST00000527467 SEH1LQ96EE3 360 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 DHRS4Q9BTZ2 278 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 DPH1Q9BZG8 443 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 MVB12BQ9H7P6 319 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 GNB4Q9HAV0 340 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 IER3IP1Q9Y5U9 82 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 CSNK1G3Q9Y6M4 447 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 TMEM269A0A1B0GVZ9 245 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 RNGTTO60942 597 aaKnown RBP6.7□□□□□ -1.34
CTNND1-216ENST00000527467 HLA-DQB2P05538 268 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 CHRM4P08173 479 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 DUSP1P28562 367 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 CNN1P51911 297 aaKnown RBP6.7□□□□□ -1.34
CTNND1-216ENST00000527467 WNT7BP56706 349 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 MS4A2Q01362 244 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 EMX1Q04741 257 aaPredicted RBP6.7□□□□□ -1.34
CTNND1-216ENST00000527467 GRM7Q14831 915 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 ZNF343Q6P1L6 599 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 TUSC5Q8IXB3 177 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 LRRC56Q8IYG6 542 aaPredicted RBP6.7□□□□□ -1.34
CTNND1-216ENST00000527467 GABRG1Q8N1C3 465 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 EIF4E3Q8N5X7 224 aaKnown RBP6.7□□□□□ -1.34
CTNND1-216ENST00000527467 EID2Q8N6I1 236 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 CELF2-AS1Q8N7Q2 184 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 ARL14EPQ8N8R7 260 aaPredicted RBP6.7□□□□□ -1.34
CTNND1-216ENST00000527467 OR11L1Q8NGX0 322 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 TMEM37Q8WXS4 190 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 KIRREL1Q96J84 757 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 AMDHD1Q96NU7 426 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 TRIB3Q96RU7 358 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 WDR61Q9GZS3 305 aaKnown RBP6.7□□□□□ -1.34
CTNND1-216ENST00000527467 PDZD7Q9H5P4 517 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 KCNMB3Q9NPA1 279 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 OBP2BQ9NPH6 170 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 IL17BQ9UHF5 180 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 A0A1B0GUH1 482 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 GFRA2O00451 464 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 SLC16A5O15375 505 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 ORM1P02763 201 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 FGF3P11487 239 aaPredicted RBP6.7□□□□□ -1.34
CTNND1-216ENST00000527467 COX5AP20674 150 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 SLC6A8P48029 635 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 SUCLG1P53597 346 aaKnown RBP6.7□□□□□ -1.34
CTNND1-216ENST00000527467 TAS2R38P59533 333 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 PCBD1P61457 104 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 PAX5Q02548 391 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 TGFBR3Q03167 851 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 TMEM115Q12893 351 aaPredicted RBP6.7□□□□□ -1.34
CTNND1-216ENST00000527467 SRSF9Q13242 221 aaKnown RBP eCLIP6.7□□□□□ -1.34
CTNND1-216ENST00000527467 ELOBQ15370 118 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 NNATQ16517 81 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 PKDCCQ504Y2 493 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 Q6ZNX1 250 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 HMGN2P46Q86SG4 172 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 PRSS3P2Q8NHM4 247 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 ZNF566Q969W8 418 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 POM121Q96HA1 1249 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 OR4C12Q96R67 309 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 GPR62Q9BZJ7 368 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 C11orf54Q9H0W9 315 aaPredicted RBP6.7□□□□□ -1.34
CTNND1-216ENST00000527467 VRTNQ9H8Y1 702 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 PRDM7Q9NQW5 492 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 CAMK2AQ9UQM7 478 aa6.7□□□□□ -1.34
CTNND1-216ENST00000527467 ZNF860A6NHJ4 632 aa6.69□□□□□ -1.34
CTNND1-216ENST00000527467 FBLL1A6NHQ2 334 aaKnown RBP6.69□□□□□ -1.34
CTNND1-216ENST00000527467 H7BY64 318 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms