RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 TMEM82A0PJX8 343 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 CPED1A4D0V7 1026 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 TMEM235A6NFC5 223 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 ZNF98A6NK75 572 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 OR4C45A6NMZ5 311 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 SULT1B1O43704 296 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 KAT7O95251 611 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 RAB3DO95716 219 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 LDOC1O95751 146 aaPredicted RBP11.93□□□□□ -0.5
CAPN1-202ENST00000524773 PNPP00491 289 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 RAB3AP20336 220 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 BDKRB2P30411 391 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 KIR3DL2P43630 455 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 DMRTC1Q5HYR2 192 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 OR52W1Q6IF63 320 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 C3orf33Q6P1S2 294 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 DPY19L2P2Q6ZN68 376 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 TMPPEQ6ZT21 453 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 NAXDQ8IW45 347 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 PM20D2Q8IYS1 436 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 FAM3DQ96BQ1 224 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 C12orf57Q99622 126 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 TRIM2Q9C040 744 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 ESRP2Q9H6T0 727 aaKnown RBP11.93□□□□□ -0.5
CAPN1-202ENST00000524773 MLXQ9UH92 298 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 SEC16AO15027 2179 aa11.93□□□□□ -0.5
CAPN1-202ENST00000524773 RFPL4AA6NLU0 287 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 RFPL4AL1F8VTS6 287 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 FADS1O60427 444 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 APBB3O95704 486 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 MYOGP15173 224 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 FAUP35544 74 aaKnown RBP11.92□□□□□ -0.5
CAPN1-202ENST00000524773 PBX2P40425 430 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 GPR18Q14330 331 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 MANEAQ5SRI9 462 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 JMJD6Q6NYC1 403 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-202ENST00000524773 LDLRAD3Q86YD5 345 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 C7orf61Q8IZ16 206 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 GVQW1Q8N7I0 195 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 FLVCR1-AS1Q8TAF5 88 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 SPPL3Q8TCT6 385 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 PAQR8Q8TEZ7 354 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 PPP1R1CQ8WVI7 109 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 FAM46BQ96A09 425 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 UTP23Q9BRU9 249 aaKnown RBP11.92□□□□□ -0.5
CAPN1-202ENST00000524773 NMNAT2Q9BZQ4 307 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 ZNF275Q9NSD4 429 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-202ENST00000524773 C14orf105Q9NVL8 296 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 MED9Q9NWA0 146 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 RASL12Q9NYN1 266 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 GMEB2Q9UKD1 530 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 A0A0A6YYC8 382 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-202ENST00000524773 PRSS38A1L453 326 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 I3L1I5 382 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-202ENST00000524773 EIF4E2O60573 245 aaKnown RBP11.92□□□□□ -0.5
CAPN1-202ENST00000524773 HLA-AP01891 365 aaKnown RBP11.92□□□□□ -0.5
CAPN1-202ENST00000524773 GLAP06280 429 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 SMIM10L1P0DMW3 83 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 CALCRP30988 508 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 SPOCK1Q08629 439 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 ILF3Q12906 894 aaKnown RBP eCLIP11.92□□□□□ -0.5
CAPN1-202ENST00000524773 DHRS2Q13268 280 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 CD226Q15762 336 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 TANGO2Q6ICL3 276 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 TMEM71Q6P5X7 295 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 ANKRD16Q6P6B7 361 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 CLEC1AQ8NC01 280 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 ACBD4Q8NC06 268 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 ROBO4Q8WZ75 1007 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 KTI12Q96EK9 354 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-202ENST00000524773 SMIM10Q96HG1 83 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 USB1Q9BQ65 265 aaKnown RBP11.92□□□□□ -0.5
CAPN1-202ENST00000524773 TIMM29Q9BSF4 260 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 CERS4Q9HA82 394 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 COLEC10Q9Y6Z7 277 aa11.92□□□□□ -0.5
CAPN1-202ENST00000524773 TMEM200CA6NKL6 621 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 F5H0A9 414 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-202ENST00000524773 ABHD16AO95870 558 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 CSRP1P21291 193 aaKnown RBP11.91□□□□□ -0.5
CAPN1-202ENST00000524773 CNR1P21554 472 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 NFYBP25208 207 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 DLSTP36957 453 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 DMWDQ09019 674 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 ENPP2Q13822 863 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 ALG10Q5BKT4 473 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 ATPAF1Q5TC12 328 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-202ENST00000524773 KRT77Q7Z794 578 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 MARCH3Q86UD3 253 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 PRR22Q8IZ63 422 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 PHOSPHO2Q8TCD6 241 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 HERVK_113Q902F9 699 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 GAS2L1Q99501 681 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-202ENST00000524773 CMSS1Q9BQ75 279 aaKnown RBP11.91□□□□□ -0.5
CAPN1-202ENST00000524773 KLF15Q9UIH9 416 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 SLC17A4Q9Y2C5 497 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 PRELID3BQ9Y3B1 194 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 ZNF175Q9Y473 711 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 C13orf42A0A1B0GVH6 325 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 KANTRA0A1W2PQU2 76 aa11.91□□□□□ -0.5
CAPN1-202ENST00000524773 ABCD4O14678 606 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms