RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 NCF1BA6NI72 391 aaPredicted RBP2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 NCF1CA8MVU1 366 aaPredicted RBP2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 PSTPIP1O43586 416 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 TOM1O60784 492 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 CLPXO76031 633 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 OXTP01178 125 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 CHTF8P0CG12 524 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 TROVE2P10155 538 aaKnown RBP eCLIP2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 ABOP16442 354 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 PSMB1P20618 241 aaKnown RBP2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 ATP6V1B2P21281 511 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 CHMLP26374 656 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 PRKAR2BP31323 418 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 AQP2P41181 271 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 NAMPTP43490 491 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 RPS5P46782 204 aaKnown RBP2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 P2RY4P51582 365 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 GPM6AP51674 278 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 CCNHP51946 323 aaPredicted RBP2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 C21orf59P57076 290 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 GNB2P62879 340 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 CSNK1G2P78368 415 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 MRPS22P82650 360 aaKnown RBP2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 IRF8Q02556 426 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 TLE4Q04727 773 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 SELENBP1Q13228 472 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 HSDL1Q3SXM5 330 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 KRT71Q3SY84 523 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 VPS26BQ4G0F5 336 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 MARCH8Q5T0T0 291 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 LCE3CQ5T5A8 94 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 TIGD3Q6B0B8 471 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 TMIGD1Q6UXZ0 262 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 CERS6Q6ZMG9 384 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 ZNF546Q86UE3 836 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 VN1R2Q8NFZ6 395 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 MCUR1Q96AQ8 359 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 FCRL1Q96LA6 429 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 IFT74Q96LB3 600 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 CFAP53Q96M91 514 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 SORT1Q99523 831 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 ATP5SQ99766 215 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 TSG101Q99816 390 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 CENPKQ9BS16 269 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 PNNQ9H307 717 aaKnown RBP2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 UGT1A7Q9HAW7 530 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 UGT1A10Q9HAW8 530 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 UGT1A8Q9HAW9 530 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 ZNF160Q9HCG1 818 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 GPATCH2LQ9NWQ4 482 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 QPCTLQ9NXS2 382 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 CALYQ9NYX4 217 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 MMP17Q9ULZ9 603 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 DDX19BQ9UMR2 479 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 NFAT5O94916 1531 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 ABCC6O95255 1503 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 COL18A1P39060 1754 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 LAMB2P55268 1798 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 ADAMTS13Q76LX8 1427 aa2.4□□□□□ -2.03
HMGN1P28-201ENST00000521340 NWD2Q9ULI1 1742 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 MRC1P22897 1456 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 NHSL1Q5SYE7 1610 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 PLEKHG2Q9H7P9 1386 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 MYH7BA7E2Y1 1941 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 A0A0J9YXY3 114 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 FAM231BA6NCW3 169 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 E7ENQ6 273 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 GOSR2O14653 212 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 RAB29O14966 203 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 CASC3O15234 703 aaKnown RBP2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 FAM189A1O60320 539 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 KLK3P07288 261 aaPredicted RBP2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 CCNB1P14635 433 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 TUBG1P23258 451 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 ANXA13P27216 316 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 NTSP30990 170 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 RDXP35241 583 aaKnown RBP2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 RORAP35398 523 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 ATP5C1P36542 298 aaKnown RBP2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 SSR1P43307 286 aaKnown RBP2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 SYKP43405 635 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 RFX3P48380 749 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 ARRB1P49407 418 aaPredicted RBP2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 CSNK1EP49674 416 aaKnown RBP2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 CLDN8P56748 225 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 PDIA2Q13087 525 aaKnown RBP2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 FZD2Q14332 565 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 IL17AQ16552 155 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 ZNF239Q16600 458 aaKnown RBP2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 SAMD4BQ5PRF9 694 aaKnown RBP2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 SCARA5Q6ZMJ2 495 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 ZNF620Q6ZNG0 422 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 LRRC74BQ6ZQY2 392 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 RALGPS2Q86X27 583 aaPredicted RBP2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 PUSL1Q8N0Z8 303 aaKnown RBP2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 ZADH2Q8N4Q0 377 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 OR2AP1Q8NGE2 309 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 SLC22A8Q8TCC7 542 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 MARCH1Q8TCQ1 289 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 ARPC1AQ92747 370 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms