RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 BCDIN3DQ7Z5W3 292 aaKnown RBP13.49□□□□□ -0.25
LSM1-203ENST00000520755 JAZF1Q86VZ6 243 aa13.49□□□□□ -0.25
LSM1-203ENST00000520755 CXorf67Q86X51 503 aaPredicted RBP13.49□□□□□ -0.25
LSM1-203ENST00000520755 OR9Q1Q8NGQ5 310 aa13.49□□□□□ -0.25
LSM1-203ENST00000520755 TMEM163Q8TC26 289 aa13.49□□□□□ -0.25
LSM1-203ENST00000520755 ZNRF4Q8WWF5 429 aa13.49□□□□□ -0.25
LSM1-203ENST00000520755 TSSK2Q96PF2 358 aa13.49□□□□□ -0.25
LSM1-203ENST00000520755 IL4I1Q96RQ9 567 aa13.49□□□□□ -0.25
LSM1-203ENST00000520755 SLC7A10Q9NS82 523 aa13.49□□□□□ -0.25
LSM1-203ENST00000520755 ELOVL5Q9NYP7 299 aa13.49□□□□□ -0.25
LSM1-203ENST00000520755 PLEKHB1Q9UF11 243 aaPredicted RBP13.49□□□□□ -0.25
LSM1-203ENST00000520755 RAB26Q9ULW5 256 aa13.49□□□□□ -0.25
LSM1-203ENST00000520755 ICE1Q9Y2F5 2266 aa13.49□□□□□ -0.25
LSM1-203ENST00000520755 CENPBD1B2RD01 187 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 SLC43A1O75387 559 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 IFNGP01579 166 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 SLC2A5P22732 501 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 COL8A1P27658 744 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 FOXG1P55316 489 aaPredicted RBP13.48□□□□□ -0.25
LSM1-203ENST00000520755 CLRN1P58418 232 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 ISL1P61371 349 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 CD47Q08722 323 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 FAPQ12884 760 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 ITGADQ13349 1161 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 IL18R1Q13478 541 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 MAD2L1BPQ15013 274 aaPredicted RBP13.48□□□□□ -0.25
LSM1-203ENST00000520755 LAIR2Q6ISS4 152 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 PLBD1Q6P4A8 553 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 LRFN4Q6PJG9 635 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 Q6ZT83 130 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 GABRG1Q8N1C3 465 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 FBLIM1Q8WUP2 373 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 PTP4A1Q93096 173 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 ZNF837Q96EG3 531 aaPredicted RBP13.48□□□□□ -0.25
LSM1-203ENST00000520755 PRRG3Q9BZD7 231 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 LINC00470Q9BZP3 86 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 NUAK2Q9H093 628 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 RPRD1BQ9NQG5 326 aaKnown RBP13.48□□□□□ -0.25
LSM1-203ENST00000520755 IMPAD1Q9NX62 359 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 GLTPQ9NZD2 209 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 MALT1Q9UDY8 824 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 PCDHGB5Q9Y5G0 923 aa13.48□□□□□ -0.25
LSM1-203ENST00000520755 UTP20O75691 2785 aaKnown RBP13.47□□□□□ -0.25
LSM1-203ENST00000520755 IGLV1-36A0A0B4J1U3 117 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 M0R3G1 203 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 TLX2O43763 284 aaPredicted RBP13.47□□□□□ -0.25
LSM1-203ENST00000520755 WBP4O75554 376 aaKnown RBP13.47□□□□□ -0.25
LSM1-203ENST00000520755 GYPBP06028 91 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 MYF6P23409 242 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 SLC25A1P53007 311 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 SNRPGP62308 76 aaKnown RBP13.47□□□□□ -0.25
LSM1-203ENST00000520755 TSC22D1Q15714 1073 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 ETFDHQ16134 617 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 C10orf128Q5T292 105 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 C9orf135Q5VTT2 229 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 AADACL4Q5VUY2 407 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 SLC25A47Q6Q0C1 308 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 CXXC5Q7LFL8 322 aaKnown RBP13.47□□□□□ -0.25
LSM1-203ENST00000520755 CPOQ8IVL8 374 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 C8orf59Q8N0T1 100 aaPredicted RBP13.47□□□□□ -0.25
LSM1-203ENST00000520755 OR6V1Q8N148 313 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 GPR137CQ8N3F9 429 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 POMGNT2Q8NAT1 580 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 OR8J1Q8NGP2 316 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 OR6N1Q8NGY5 312 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 RHOXF1Q8NHV9 184 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 CNIH3Q8TBE1 160 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 KISS1RQ969F8 398 aaPredicted RBP13.47□□□□□ -0.25
LSM1-203ENST00000520755 MCHR2Q969V1 340 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 PLEKHA8Q96JA3 519 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 LRR1Q96L50 414 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 APOL4Q9BPW4 351 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 RASSF1Q9NS23 344 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 ASB6Q9NWX5 421 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 DNAJC27Q9NZQ0 273 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 UGT2A1Q9Y4X1 527 aa13.47□□□□□ -0.25
LSM1-203ENST00000520755 CCDC182A6NF36 153 aa13.46□□□□□ -0.25
LSM1-203ENST00000520755 PRR23D1E9PI22 279 aaPredicted RBP13.46□□□□□ -0.25
LSM1-203ENST00000520755 C16orf97H3BN30 126 aa13.46□□□□□ -0.25
LSM1-203ENST00000520755 AHCYL1O43865 530 aa13.46□□□□□ -0.25
LSM1-203ENST00000520755 LYZL6O75951 148 aa13.46□□□□□ -0.25
LSM1-203ENST00000520755 CNOT4O95628 575 aaKnown RBP13.46□□□□□ -0.25
LSM1-203ENST00000520755 RENP00797 406 aa13.46□□□□□ -0.25
LSM1-203ENST00000520755 QDPRP09417 244 aa13.46□□□□□ -0.25
LSM1-203ENST00000520755 PRR23D2P0DMB1 279 aaPredicted RBP13.46□□□□□ -0.25
LSM1-203ENST00000520755 SPI1P17947 270 aa13.46□□□□□ -0.25
LSM1-203ENST00000520755 IGHV1-2P23083 117 aa13.46□□□□□ -0.25
LSM1-203ENST00000520755 CCKARP32238 428 aa13.46□□□□□ -0.25
LSM1-203ENST00000520755 PYCR1P32322 319 aa13.46□□□□□ -0.25
LSM1-203ENST00000520755 UGT2B10P36537 528 aa13.46□□□□□ -0.25
LSM1-203ENST00000520755 IL5RAQ01344 420 aa13.46□□□□□ -0.25
LSM1-203ENST00000520755 LINC01590Q5TEZ4 76 aa13.46□□□□□ -0.25
LSM1-203ENST00000520755 SP5Q6BEB4 398 aaPredicted RBP13.46□□□□□ -0.25
LSM1-203ENST00000520755 LYPD4Q6UWN0 246 aa13.46□□□□□ -0.25
LSM1-203ENST00000520755 STAC2Q6ZMT1 411 aa13.46□□□□□ -0.25
LSM1-203ENST00000520755 MEX3BQ6ZN04 569 aaKnown RBP13.46□□□□□ -0.25
LSM1-203ENST00000520755 ZBTB46Q86UZ6 589 aa13.46□□□□□ -0.25
LSM1-203ENST00000520755 DEPDC4Q8N2C3 294 aa13.46□□□□□ -0.25
LSM1-203ENST00000520755 SETD9Q8NE22 299 aa13.46□□□□□ -0.25
LSM1-203ENST00000520755 TEX12Q9BXU0 123 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms