RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 Q9H521 79 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 C12orf49Q9H741 205 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 CRLF2Q9HC73 371 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 GPR35Q9HC97 309 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 H2AFY2Q9P0M6 372 aaPredicted RBP8.36□□□□□ -1.07
CLN8-203ENST00000518780 RAB26Q9ULW5 256 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 ESPL1Q14674 2120 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 ZGRF1Q86YA3 2104 aa8.36□□□□□ -1.07
CLN8-203ENST00000518780 MYO18BQ8IUG5 2567 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 OR6C68A6NDL8 312 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 ZNF99A8MXY4 864 aaPredicted RBP8.35□□□□□ -1.07
CLN8-203ENST00000518780 EEF1E1-BLOC1S5C9J1V9 151 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 EEF1E1O43324 174 aaKnown RBP8.35□□□□□ -1.07
CLN8-203ENST00000518780 TLX2O43763 284 aaPredicted RBP8.35□□□□□ -1.07
CLN8-203ENST00000518780 SLC16A7O60669 478 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 HRGP04196 525 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 PPP3CBP16298 524 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 CD79BP40259 229 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 AQP4P55087 323 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 MRPS34P82930 218 aaKnown RBP8.35□□□□□ -1.07
CLN8-203ENST00000518780 SORDQ00796 357 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 FAPQ12884 760 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 CRMP1Q14194 572 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 OCLNQ16625 522 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 SFRP5Q5T4F7 317 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 NXNL2Q5VZ03 156 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 CARD17Q5XLA6 110 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 ANKRD16Q6P6B7 361 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 ZNF474Q6S9Z5 364 aaPredicted RBP8.35□□□□□ -1.07
CLN8-203ENST00000518780 FOXL2NBQ6ZUU3 175 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 PTCHD4Q6ZW05 846 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 LSRQ86X29 649 aaPredicted RBP8.35□□□□□ -1.07
CLN8-203ENST00000518780 GID4Q8IVV7 300 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 GLB1L2Q8IW92 636 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 OR6V1Q8N148 313 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 TCEANCQ8N8B7 351 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 RELL2Q8NC24 303 aaPredicted RBP8.35□□□□□ -1.07
CLN8-203ENST00000518780 STEAP2Q8NFT2 490 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 RHOXF1Q8NHV9 184 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 FAM81AQ8TBF8 368 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 CYGBQ8WWM9 190 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 ITLN2Q8WWU7 325 aaPredicted RBP8.35□□□□□ -1.07
CLN8-203ENST00000518780 RNASE6Q93091 150 aaKnown RBP8.35□□□□□ -1.07
CLN8-203ENST00000518780 PTP4A1Q93096 173 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 MUS81Q96NY9 551 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 RBM24Q9BX46 236 aaKnown RBP8.35□□□□□ -1.07
CLN8-203ENST00000518780 NUAK2Q9H093 628 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 OPN3Q9H1Y3 402 aaPredicted RBP8.35□□□□□ -1.07
CLN8-203ENST00000518780 SIAEQ9HAT2 523 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 OBP2BQ9NPH6 170 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 PRSS50Q9UI38 385 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 KCNG2Q9UJ96 466 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 RALYQ9UKM9 306 aaKnown RBP8.35□□□□□ -1.07
CLN8-203ENST00000518780 B9D1Q9UPM9 204 aa8.35□□□□□ -1.07
CLN8-203ENST00000518780 IGLV1-36A0A0B4J1U3 117 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 SH3D21A4FU49 640 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 CLEC18AA5D8T8 446 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 SLC22A31A6NKX4 558 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 C16orf97H3BN30 126 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 PRKYO43930 277 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 ZG16O60844 167 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 GLCEO94923 617 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 AGFG2O95081 481 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 FARS2O95363 451 aaKnown RBP8.34□□□□□ -1.07
CLN8-203ENST00000518780 OR8G3PP0DMU2 310 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 SPI1P17947 270 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 LAP3P28838 519 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 FMO3P31513 532 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 LSM6P62312 80 aaKnown RBP8.34□□□□□ -1.07
CLN8-203ENST00000518780 CSNK2BP67870 215 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 HSF2Q03933 536 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 KCNMB1Q16558 191 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 CEACAM16Q2WEN9 425 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 LCN1P1Q5VSP4 162 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 FAM27BQ5VT28 67 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 AADACL4Q5VUY2 407 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 ZNF691Q5VV52 312 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 CLEC18BQ6UXF7 455 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 NCCRP1Q6ZVX7 275 aaPredicted RBP8.34□□□□□ -1.07
CLN8-203ENST00000518780 USP51Q70EK9 711 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 CXXC5Q7LFL8 322 aaKnown RBP8.34□□□□□ -1.07
CLN8-203ENST00000518780 SYT9Q86SS6 491 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 CPOQ8IVL8 374 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 C8orf59Q8N0T1 100 aaPredicted RBP8.34□□□□□ -1.07
CLN8-203ENST00000518780 ZNF433Q8N7K0 673 aaPredicted RBP8.34□□□□□ -1.07
CLN8-203ENST00000518780 CLEC18CQ8NCF0 446 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 SDR9C7Q8NEX9 313 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 KISS1RQ969F8 398 aaPredicted RBP8.34□□□□□ -1.07
CLN8-203ENST00000518780 ALKBH3Q96Q83 286 aaPredicted RBP8.34□□□□□ -1.07
CLN8-203ENST00000518780 FOXB1Q99853 325 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 ANKRD60Q9BZ19 345 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 KCNN2Q9H2S1 579 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 SRA1Q9HD15 236 aaKnown RBP8.34□□□□□ -1.07
CLN8-203ENST00000518780 RPRD1BQ9NQG5 326 aaKnown RBP8.34□□□□□ -1.07
CLN8-203ENST00000518780 TMEM38BQ9NVV0 291 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 CLN6Q9NWW5 311 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 HAO2Q9NYQ3 351 aa8.34□□□□□ -1.07
CLN8-203ENST00000518780 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.34□□□□□ -1.07
CLN8-203ENST00000518780 KLF2Q9Y5W3 355 aaPredicted RBP8.34□□□□□ -1.07
CLN8-203ENST00000518780 SPENQ96T58 3664 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms