RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 C2orf80Q0P641 193 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 ATP6V1FQ16864 119 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 EXOC3L4Q17RC7 722 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 MEDAGQ5VYS4 303 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 RUSC1-AS1Q66K80 236 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 FAM173BQ6P4H8 233 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 CD300LGQ6UXG3 332 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 Q6ZSR9 355 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 LHFPL3Q86UP9 236 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 KLHDC8BQ8IXV7 354 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 PUSL1Q8N0Z8 303 aaKnown RBP4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 PDIK1LQ8N165 341 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 HSD17B11Q8NBQ5 300 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 SPATA3Q8NHX4 192 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 ZNF564Q8TBZ8 553 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 ACER1Q8TDN7 264 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 SMARCD2Q92925 531 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 SEC22AQ96IW7 307 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 SERPINB12Q96P63 405 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 ZNF251Q9BRH9 671 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 HCAR1Q9BXC0 346 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 TMEM38AQ9H6F2 299 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 RNF167Q9H6Y7 350 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 SLC38A10Q9HBR0 1119 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 B3GAT2Q9NPZ5 323 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 MAT2BQ9NZL9 334 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 GNPTGQ9UJJ9 305 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 HYOU1Q9Y4L1 999 aa4.56□□□□□ -1.68
CTNNA1-202ENST00000517533 A0A0G2JLW4 131 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 E9PLD3 99 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 MRPS12O15235 138 aaKnown RBP4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 TOX3O15405 576 aaPredicted RBP4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 AQP9O43315 295 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 PSIP1O75475 530 aaKnown RBP4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 OCMP0CE72 109 aaPredicted RBP4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 ZNF250P15622 560 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 SLC2A5P22732 501 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 CHRNB4P30926 498 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 KDELR2P33947 212 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 EVI2BP34910 448 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 RBM34P42696 430 aaKnown RBP4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 GSK3BP49841 420 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 SSR4P51571 173 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 CLDN6P56747 220 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 HNRNPA0Q13151 305 aaKnown RBP4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 C5orf64Q2M2E5 130 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 PGGHGQ32M88 737 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 NSUN5P1Q3KNT7 163 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 C14orf28Q4W4Y0 310 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 VAX1Q5SQQ9 334 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 FAM151BQ6UXP7 276 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 C18orf65Q6ZTR6 163 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 ABHD13Q7L211 337 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 DCXRQ7Z4W1 244 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 LRRC34Q8IZ02 419 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 LSMEM2Q8N112 164 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 ABHD12Q8N2K0 398 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 ITFG1Q8TB96 612 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 CXorf40AQ8TE69 158 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 DYNLL2Q96FJ2 89 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 PAGE5Q96GU1 130 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 ATXN7L3BQ96GX2 97 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 POM121L2Q96KW2 1035 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 ZFP3Q96NJ6 502 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 TIMM29Q9BSF4 260 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 ACTR6Q9GZN1 396 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 SAV1Q9H4B6 383 aaPredicted RBP4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 ARMC7Q9H6L4 198 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 UBE2ZQ9H832 354 aaPredicted RBP4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 SPHK2Q9NRA0 654 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 CLN6Q9NWW5 311 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 GIN1Q9NXP7 522 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 RARRES3Q9UL19 164 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 MGAT4AQ9UM21 535 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 FADS3Q9Y5Q0 445 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 CPQQ9Y646 472 aa4.55□□□□□ -1.68
CTNNA1-202ENST00000517533 A0A087WW49 117 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 GLYATL1P3A0A0U1RQE8 302 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 LOC110117498-PIK3R3F6TDL0 507 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 TRAPPC3O43617 180 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 TNFAIP8O95379 198 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 AHSA1O95433 338 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 LSM8O95777 96 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 CATP04040 527 aaKnown RBP4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 HCKP08631 526 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 TACSTD2P09758 323 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 CFC1BP0CG36 223 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 CFC1P0CG37 223 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 ALDH3B2P48448 385 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 GPM6AP51674 278 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 HILS1P60008 231 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 TPBGQ13641 420 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 CYLC2Q14093 348 aaPredicted RBP4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 QRICH1Q2TAL8 776 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 ADAMTSL4-AS1Q5T5F5 129 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 ADAM5Q6NVV9 412 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 FAHD1Q6P587 224 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 LCLAT1Q6UWP7 414 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 CLEC18BQ6UXF7 455 aa4.54□□□□□ -1.68
CTNNA1-202ENST00000517533 USP43Q70EL4 1123 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms