RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 THEM4Q5T1C6 240 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 FAM27BQ5VT28 67 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 AGAP6Q5VW22 663 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 FAM205BPQ63HN1 556 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 ZNF770Q6IQ21 691 aaPredicted RBP8.41□□□□□ -1.06
RNF4-221ENST00000513643 C1orf94Q6P1W5 598 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 YTHDF3Q7Z739 585 aaKnown RBP8.41□□□□□ -1.06
RNF4-221ENST00000513643 DPPA2Q7Z7J5 298 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 DEPDC4Q8N2C3 294 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 MUC15Q8N387 334 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 OR4F15Q8NGB8 312 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 OR4K5Q8NGD3 323 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 OR4C15Q8NGM1 316 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 OR13C2Q8NGS9 318 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 FNDC8Q8TC99 324 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 BCAS4Q8TDM0 211 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 POP5Q969H6 163 aaKnown RBP8.41□□□□□ -1.06
RNF4-221ENST00000513643 ASB9Q96DX5 294 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 PERPQ96FX8 193 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 COX4I2Q96KJ9 171 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 MAGIXQ9H6Y5 334 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 ZNF442Q9H7R0 627 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 SIAEQ9HAT2 523 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 CA10Q9NS85 328 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 FAIMQ9NVQ4 179 aa8.41□□□□□ -1.06
RNF4-221ENST00000513643 FN1P02751 2386 aaKnown RBP8.4□□□□□ -1.06
RNF4-221ENST00000513643 NDUFS7O75251 213 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 KRT36O76013 467 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 UBL3O95164 117 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 IGHV4-39P01824 125 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 FABP3P05413 133 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 IGFBP1P08833 259 aaPredicted RBP8.4□□□□□ -1.06
RNF4-221ENST00000513643 SAGP10523 405 aaPredicted RBP8.4□□□□□ -1.06
RNF4-221ENST00000513643 APEHP13798 732 aaKnown RBP8.4□□□□□ -1.06
RNF4-221ENST00000513643 NR4A1P22736 598 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 FPR3P25089 353 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 CDKN1AP38936 164 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 GPR4P46093 362 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 FABP6P51161 128 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 IDH3GP51553 393 aaPredicted RBP8.4□□□□□ -1.06
RNF4-221ENST00000513643 CLRN1P58418 232 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 RAB1AP62820 205 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 TRAP1Q12931 704 aaKnown RBP8.4□□□□□ -1.06
RNF4-221ENST00000513643 ADIPOQQ15848 244 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 MSMPQ1L6U9 139 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 THSD4Q6ZMP0 1018 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 ZDHHC21Q8IVQ6 265 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 CDK20Q8IZL9 346 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 CIARTQ8N365 385 aaPredicted RBP8.4□□□□□ -1.06
RNF4-221ENST00000513643 CLDN22Q8N7P3 220 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 SYT14Q8NB59 555 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 OR52J3Q8NH60 311 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 MS4A3Q96HJ5 214 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 FAM46AQ96IP4 442 aaKnown RBP8.4□□□□□ -1.06
RNF4-221ENST00000513643 TRIM15Q9C019 465 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 PLK3Q9H4B4 646 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 FBXL3Q9UKT7 428 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 LYVE1Q9Y5Y7 322 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 ATP23Q9Y6H3 246 aa8.4□□□□□ -1.06
RNF4-221ENST00000513643 SLC22A23A1A5C7 686 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 A6NIZ1 184 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 ARPC3O15145 178 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 ENTPD5O75356 428 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 UBOX5O94941 541 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 NDUFB2O95178 105 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 GADD45GO95257 159 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 SLC2A10O95528 541 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 SCG5P05408 212 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 PATE4P0C8F1 98 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 NPR2P20594 1047 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 RRM2P31350 389 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 ACVR1BP36896 505 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 SERPINF1P36955 418 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 GIPRP48546 466 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 ATP5J2P56134 94 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 RAP1BP61224 184 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 RAP1AP62834 184 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 ERVK-25P63136 954 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 MXRA7P84157 204 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 MYBPC1Q00872 1141 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 FMODQ06828 376 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 PIGFQ07326 219 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 BNIP1Q12981 228 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 MESTQ5EB52 335 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 CYP2R1Q6VVX0 501 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 DPY19L2P2Q6ZN68 376 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 RRM2BQ7LG56 351 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 IGFN1Q86VF2 1251 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 DHFR2Q86XF0 187 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 FBXL14Q8N1E6 418 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 OR10H5Q8NGA6 315 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 GTPBP3Q969Y2 492 aaKnown RBP8.39□□□□□ -1.07
RNF4-221ENST00000513643 MCUR1Q96AQ8 359 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 TRMT61AQ96FX7 289 aaKnown RBP8.39□□□□□ -1.07
RNF4-221ENST00000513643 RSRC1Q96IZ7 334 aaKnown RBP8.39□□□□□ -1.07
RNF4-221ENST00000513643 CLPTM1LQ96KA5 538 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 C18orf12Q96KH6 178 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 Q96M85 177 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 Q96MF0 132 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 RBP7Q96R05 134 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms