RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 SBK2P0C263 348 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 B4GALT1P15291 398 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 PPIBP23284 216 aaKnown RBP9.41□□□□□ -0.9
RNF4-218ENST00000513284 RPS5P46782 204 aaKnown RBP9.41□□□□□ -0.9
RNF4-218ENST00000513284 POLR2JP52435 117 aaKnown RBP9.41□□□□□ -0.9
RNF4-218ENST00000513284 SLC18A1P54219 525 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 KLF3P57682 345 aaPredicted RBP9.41□□□□□ -0.9
RNF4-218ENST00000513284 PROK1P58294 105 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 MS4A18Q3C1V0 323 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 BEND6Q5SZJ8 279 aaPredicted RBP9.41□□□□□ -0.9
RNF4-218ENST00000513284 CARD17Q5XLA6 110 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 SERPINA11Q86U17 422 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 KRT73Q86Y46 540 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 MIER2Q8N344 545 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 PARP8Q8N3A8 854 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 OR52E2Q8NGJ4 325 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 LINC01006Q8NI28 216 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 ZNF519Q8TB69 540 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 ST7LQ8TDW4 575 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 DNAJA4Q8WW22 397 aaPredicted RBP9.41□□□□□ -0.9
RNF4-218ENST00000513284 TXNDC15Q96J42 360 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 EPYCQ99645 322 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 CHIAQ9BZP6 476 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 OR51B6Q9H340 312 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 DENND2DQ9H6A0 471 aaPredicted RBP9.41□□□□□ -0.9
RNF4-218ENST00000513284 EVA1AQ9H8M9 152 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 BCL2L10Q9HD36 194 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 SDR39U1Q9NRG7 319 aaPredicted RBP9.41□□□□□ -0.9
RNF4-218ENST00000513284 SLC6A13Q9NSD5 602 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 DECR2Q9NUI1 292 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 RNF114Q9Y508 228 aa9.41□□□□□ -0.9
RNF4-218ENST00000513284 TMEM120BA0PK00 339 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 ISPDA4D126 451 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 CLIC1O00299 241 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 TPD52L2O43399 206 aaKnown RBP9.4□□□□□ -0.9
RNF4-218ENST00000513284 SNNO75324 88 aaPredicted RBP9.4□□□□□ -0.9
RNF4-218ENST00000513284 IGHV3-13P01766 116 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 OR8G3PP0DMU2 310 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 ETS2P15036 469 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 NQO1P15559 274 aaKnown RBP9.4□□□□□ -0.9
RNF4-218ENST00000513284 PRKAR1BP31321 381 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 LSP1P33241 339 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 MMP15P51511 669 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 MVDP53602 400 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 RPS26P11Q5JNZ5 115 aaPredicted RBP9.4□□□□□ -0.9
RNF4-218ENST00000513284 SAMD5Q5TGI4 173 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 C6orf89Q6UWU4 347 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 WDR88Q6ZMY6 472 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 UEVLDQ8IX04 471 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 CLIP4Q8N3C7 705 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 GOLGA6L1Q8N7Z2 621 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 MGARPQ8TDB4 240 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 TAAR8Q969N4 342 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 UPRTQ96BW1 309 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 ELMOD3Q96FG2 381 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 MAELQ96JY0 434 aaKnown RBP9.4□□□□□ -0.9
RNF4-218ENST00000513284 LRR1Q96L50 414 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 ASPNQ9BXN1 380 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 MARCH7Q9H992 704 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 SAP30LQ9HAJ7 183 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 PATZ1Q9HBE1 687 aaKnown RBP9.4□□□□□ -0.9
RNF4-218ENST00000513284 A4GALTQ9NPC4 353 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 SLCO1C1Q9NYB5 712 aa9.4□□□□□ -0.9
RNF4-218ENST00000513284 TRAV36DV7A0A075B6V5 113 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 SLC22A23A1A5C7 686 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 PRORSD1PA6NEY8 169 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 A8MXK9 166 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 F5H0A9 414 aaPredicted RBP9.39□□□□□ -0.91
RNF4-218ENST00000513284 M0R082 166 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 SPRY3O43610 288 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 RAB36O95755 333 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 PPIAL4GP0DN37 164 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 BMP2P12643 396 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 ZNF81P51508 661 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 UCP2P55851 309 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 GLO1Q04760 184 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 RGNQ15493 299 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 ALG10BQ5I7T1 473 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 VAX1Q5SQQ9 334 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 FAM91A1Q658Y4 838 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 Q6YL49 198 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 H1FNTQ75WM6 255 aaPredicted RBP9.39□□□□□ -0.91
RNF4-218ENST00000513284 LRRC28Q86X40 367 aaPredicted RBP9.39□□□□□ -0.91
RNF4-218ENST00000513284 POU5F2Q8N7G0 328 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 LSMEM1Q8N8F7 131 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 ADPRHL1Q8NDY3 354 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 OR6S1Q8NH40 331 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 ZNF417Q8TAU3 575 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 C11orf40Q8WZ69 217 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 DACT3Q96B18 629 aaPredicted RBP9.39□□□□□ -0.91
RNF4-218ENST00000513284 TLCD1Q96CP7 247 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 SLC47A1Q96FL8 570 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 DCLRE1CQ96SD1 692 aaKnown RBP9.39□□□□□ -0.91
RNF4-218ENST00000513284 ZNF587Q96SQ5 575 aaPredicted RBP9.39□□□□□ -0.91
RNF4-218ENST00000513284 MRI1Q9BV20 369 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 TMEM27Q9HBJ8 222 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 TMBIM4Q9HC24 238 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.39□□□□□ -0.91
RNF4-218ENST00000513284 GPR160Q9UJ42 338 aa9.39□□□□□ -0.91
RNF4-218ENST00000513284 KLHL21Q9UJP4 597 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms