RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 KIF25Q9UIL4 384 aa13.58□□□□□ -0.24
USP38-202ENST00000510377 RP1P56715 2156 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 RHPN2P1A8MT19 583 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 NDUFB6O95139 128 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 HNRNPA2B1P22626 353 aaKnown RBP13.57□□□□□ -0.24
USP38-202ENST00000510377 OR7A5Q15622 319 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 COL13A1Q5TAT6 717 aaPredicted RBP13.57□□□□□ -0.24
USP38-202ENST00000510377 SLC25A24Q6NUK1 477 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 TRAPPC6BQ86SZ2 158 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 GABRG1Q8N1C3 465 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 OR11G2Q8NGC1 345 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 LMX1AQ8TE12 382 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 SLC41A2Q96JW4 573 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 UBL7Q96S82 380 aaPredicted RBP13.57□□□□□ -0.24
USP38-202ENST00000510377 SMIM3Q9BZL3 60 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 ETV7Q9Y603 341 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 FBXO24O75426 580 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 SLC35E2P0CK97 266 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 CALCBP10092 127 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 CAPZA1P52907 286 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 NFATC4Q14934 902 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 SLC29A4Q7RTT9 530 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 ZNF440Q8IYI8 595 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 OR2G2Q8NGZ5 317 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 C2CD4CQ8TF44 421 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 PHYHIPQ92561 330 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 ARL11Q969Q4 196 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 TINAGL1Q9GZM7 467 aaPredicted RBP13.57□□□□□ -0.24
USP38-202ENST00000510377 HHLA2Q9UM44 414 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 VDAC3Q9Y277 283 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 RIF1Q5UIP0 2472 aaKnown RBP13.57□□□□□ -0.24
USP38-202ENST00000510377 TMEM269A0A1B0GVZ9 245 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 TCRBV21S2A2A0A5A6 115 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 GGT3PA6NGU5 568 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 C4orf47A7E2U8 309 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 SPINT1O43278 529 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 ZP3P21754 424 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 RAB38P57729 211 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 NKAPLQ5M9Q1 402 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 PWWP2BQ6NUJ5 590 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 OR4S1Q8NGB4 309 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 OR14A16Q8NHC5 309 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 RSC1A1Q92681 617 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 FOXRED1Q96CU9 486 aaPredicted RBP13.57□□□□□ -0.24
USP38-202ENST00000510377 FAM71F1Q96KD3 344 aaPredicted RBP13.57□□□□□ -0.24
USP38-202ENST00000510377 ZNF587Q96SQ5 575 aaPredicted RBP13.57□□□□□ -0.24
USP38-202ENST00000510377 BCL2L14Q9BZR8 327 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 SELENOIQ9C0D9 397 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 TAS2R4Q9NYW5 299 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 CES1P1Q9UKY3 287 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 ENTPD2Q9Y5L3 495 aa13.57□□□□□ -0.24
USP38-202ENST00000510377 LOC105371267A0A1B0GV96 52 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 OR5H14A6NHG9 310 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 ZNF264O43296 627 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 ZIC2O95409 532 aaPredicted RBP13.56□□□□□ -0.24
USP38-202ENST00000510377 CBX7O95931 251 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 AMY2BP19961 511 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 UBE2IP63279 158 aaKnown RBP13.56□□□□□ -0.24
USP38-202ENST00000510377 DNM1P34Q6PK57 102 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 OR13C9Q8NGT0 318 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 CD300LFQ8TDQ1 290 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 THRSPQ92748 146 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 ACKR4Q9NPB9 350 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 UBQLN4Q9NRR5 601 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 PCDHGA5Q9Y5G8 931 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 TP53BP1Q12888 1972 aaPredicted RBP13.56□□□□□ -0.24
USP38-202ENST00000510377 ZNF208O43345 1280 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 CDKN2AP42771 156 aaKnown RBP13.56□□□□□ -0.24
USP38-202ENST00000510377 EID2Q8N6I1 236 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 FAM71CQ8NEG0 241 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 NUDT22Q9BRQ3 303 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 ST6GALNAC5Q9BVH7 336 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 SLCO1C1Q9NYB5 712 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 C2orf72A6NCS6 295 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 SYT7O43581 403 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 HOXB5P09067 269 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 GAS1P54826 345 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 RAG2P55895 527 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 RPL18Q07020 188 aaKnown RBP13.56□□□□□ -0.24
USP38-202ENST00000510377 ZNF616Q08AN1 781 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 NSDHLQ15738 373 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 CDH26Q8IXH8 852 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 CNTNAP3BQ96NU0 1288 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 SPACA5Q96QH8 159 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 LMF2Q9BU23 707 aaKnown RBP13.56□□□□□ -0.24
USP38-202ENST00000510377 ST6GALNAC2Q9UJ37 374 aa13.56□□□□□ -0.24
USP38-202ENST00000510377 A0A0D9SG52 128 aa13.55□□□□□ -0.24
USP38-202ENST00000510377 LOC100289279A0A1B0GTE1 492 aa13.55□□□□□ -0.24
USP38-202ENST00000510377 SNRPGP15A8MWD9 76 aa13.55□□□□□ -0.24
USP38-202ENST00000510377 P2RY10O00398 339 aa13.55□□□□□ -0.24
USP38-202ENST00000510377 OR4E1P0C645 316 aa13.55□□□□□ -0.24
USP38-202ENST00000510377 KRBOX4Q5JUW0 171 aa13.55□□□□□ -0.24
USP38-202ENST00000510377 OR1J2Q8NGS2 313 aa13.55□□□□□ -0.24
USP38-202ENST00000510377 PGLYRP3Q96LB9 341 aa13.55□□□□□ -0.24
USP38-202ENST00000510377 EP300Q09472 2414 aaPredicted RBP13.55□□□□□ -0.24
USP38-202ENST00000510377 HEATR5BQ9P2D3 2071 aa13.55□□□□□ -0.24
USP38-202ENST00000510377 ADPRHP54922 357 aa13.55□□□□□ -0.24
USP38-202ENST00000510377 OR1J4Q8NGS1 313 aa13.55□□□□□ -0.24
USP38-202ENST00000510377 NKX6-2Q9C056 277 aaPredicted RBP13.55□□□□□ -0.24
USP38-202ENST00000510377 AICDAQ9GZX7 198 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms