RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 ADRA2AP08913 450 aa18.25■□□□□ 0.51
LIN54-208ENST00000509748 MMP7P09237 267 aaPredicted RBP18.25■□□□□ 0.51
LIN54-208ENST00000509748 IFI30P13284 250 aa18.25■□□□□ 0.51
LIN54-208ENST00000509748 GIFP27352 417 aa18.25■□□□□ 0.51
LIN54-208ENST00000509748 SEC24CP53992 1094 aa18.25■□□□□ 0.51
LIN54-208ENST00000509748 CYB5R2Q6BCY4 276 aa18.25■□□□□ 0.51
LIN54-208ENST00000509748 MEX3DQ86XN8 651 aaKnown RBP18.25■□□□□ 0.51
LIN54-208ENST00000509748 KCNK17Q96T54 332 aa18.25■□□□□ 0.51
LIN54-208ENST00000509748 ELAC2Q9BQ52 826 aaKnown RBP18.25■□□□□ 0.51
LIN54-208ENST00000509748 ENTPD5O75356 428 aa18.24■□□□□ 0.51
LIN54-208ENST00000509748 FARS2O95363 451 aaKnown RBP18.24■□□□□ 0.51
LIN54-208ENST00000509748 SLC2A10O95528 541 aa18.24■□□□□ 0.51
LIN54-208ENST00000509748 ZNF682O95780 498 aa18.24■□□□□ 0.51
LIN54-208ENST00000509748 IFNW1P05000 195 aa18.24■□□□□ 0.51
LIN54-208ENST00000509748 DAOP14920 347 aa18.24■□□□□ 0.51
LIN54-208ENST00000509748 PRKCDQ05655 676 aa18.24■□□□□ 0.51
LIN54-208ENST00000509748 GGTLC2Q14390 218 aa18.24■□□□□ 0.51
LIN54-208ENST00000509748 CARTPTQ16568 116 aa18.24■□□□□ 0.51
LIN54-208ENST00000509748 SLC25A47Q6Q0C1 308 aa18.24■□□□□ 0.51
LIN54-208ENST00000509748 HDDC2Q7Z4H3 204 aa18.24■□□□□ 0.51
LIN54-208ENST00000509748 DPPA2Q7Z7J5 298 aa18.24■□□□□ 0.51
LIN54-208ENST00000509748 NRMQ8IXM6 262 aa18.24■□□□□ 0.51
LIN54-208ENST00000509748 GEMIN6Q8WXD5 167 aaKnown RBP18.24■□□□□ 0.51
LIN54-208ENST00000509748 FNDC11Q9BVV2 318 aa18.24■□□□□ 0.51
LIN54-208ENST00000509748 BPESC1Q9GZL8 116 aa18.24■□□□□ 0.51
LIN54-208ENST00000509748 MYEF2Q9P2K5 600 aaKnown RBP18.24■□□□□ 0.51
LIN54-208ENST00000509748 ABCD2Q9UBJ2 740 aa18.24■□□□□ 0.51
LIN54-208ENST00000509748 SVEP1Q4LDE5 3571 aa18.24■□□□□ 0.51
LIN54-208ENST00000509748 A0A087WUU8 490 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 SYNGR3O43761 229 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 SERPINA1P01009 418 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 IGHMP01871 453 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 CCL2P13500 99 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 ZNF84P51523 738 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 MRPS34P82930 218 aaKnown RBP18.23■□□□□ 0.51
LIN54-208ENST00000509748 FMODQ06828 376 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 TRAM2Q15035 370 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 IFI44LQ53G44 452 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 ALG10Q5BKT4 473 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 TMEM53Q6P2H8 277 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 SLC16A14Q7RTX9 510 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 ZNF786Q8N393 782 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 SLC30A7Q8NEW0 376 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 NABP1Q96AH0 204 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 HSH2DQ96JZ2 352 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 SYT3Q9BQG1 590 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 SIAEQ9HAT2 523 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 SMURF2Q9HAU4 748 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 DYNLRB1Q9NP97 96 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 TMEM160Q9NX00 188 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 STX18Q9P2W9 335 aaKnown RBP18.23■□□□□ 0.51
LIN54-208ENST00000509748 SLC7A8Q9UHI5 535 aa18.23■□□□□ 0.51
LIN54-208ENST00000509748 ZNF346Q9UL40 294 aaKnown RBP18.23■□□□□ 0.51
LIN54-208ENST00000509748 GSTA4O15217 222 aa18.22■□□□□ 0.51
LIN54-208ENST00000509748 NCK1P16333 377 aa18.22■□□□□ 0.51
LIN54-208ENST00000509748 ZNF16P17020 682 aaPredicted RBP18.22■□□□□ 0.51
LIN54-208ENST00000509748 CDAP32320 146 aa18.22■□□□□ 0.51
LIN54-208ENST00000509748 IFNA8P32881 189 aa18.22■□□□□ 0.51
LIN54-208ENST00000509748 NUDT2P50583 147 aa18.22■□□□□ 0.51
LIN54-208ENST00000509748 PSME3P61289 254 aa18.22■□□□□ 0.51
LIN54-208ENST00000509748 RPL27P61353 136 aaKnown RBP18.22■□□□□ 0.51
LIN54-208ENST00000509748 GALK2Q01415 458 aa18.22■□□□□ 0.51
LIN54-208ENST00000509748 TAF11Q15544 211 aa18.22■□□□□ 0.51
LIN54-208ENST00000509748 SLC36A2Q495M3 483 aa18.22■□□□□ 0.51
LIN54-208ENST00000509748 GKAP1Q5VSY0 366 aaPredicted RBP18.22■□□□□ 0.51
LIN54-208ENST00000509748 TBPL2Q6SJ96 375 aa18.22■□□□□ 0.51
LIN54-208ENST00000509748 CLDN22Q8N7P3 220 aa18.22■□□□□ 0.51
LIN54-208ENST00000509748 RBM15BQ8NDT2 890 aaKnown RBP18.22■□□□□ 0.51
LIN54-208ENST00000509748 UBASH3BQ8TF42 649 aa18.22■□□□□ 0.51
LIN54-208ENST00000509748 ACOT11Q8WXI4 607 aaPredicted RBP18.22■□□□□ 0.51
LIN54-208ENST00000509748 TPK1Q9H3S4 243 aa18.22■□□□□ 0.51
LIN54-208ENST00000509748 RNF121Q9H920 327 aa18.22■□□□□ 0.51
LIN54-208ENST00000509748 REV1Q9UBZ9 1251 aa18.22■□□□□ 0.51
LIN54-208ENST00000509748 FZR1Q9UM11 496 aa18.22■□□□□ 0.51
LIN54-208ENST00000509748 TRAV27A0A087WT01 109 aa18.21■□□□□ 0.51
LIN54-208ENST00000509748 LYNX1G3V0Z9 82 aa18.21■□□□□ 0.51
LIN54-208ENST00000509748 MGRN1O60291 552 aa18.21■□□□□ 0.51
LIN54-208ENST00000509748 SNAP29O95721 258 aa18.21■□□□□ 0.51
LIN54-208ENST00000509748 LYNX1P0DP58 116 aa18.21■□□□□ 0.51
LIN54-208ENST00000509748 ZNF23P17027 643 aa18.21■□□□□ 0.51
LIN54-208ENST00000509748 DRD4P21917 467 aa18.21■□□□□ 0.51
LIN54-208ENST00000509748 ALDH3B1P43353 468 aa18.21■□□□□ 0.51
LIN54-208ENST00000509748 GZMKP49863 264 aa18.21■□□□□ 0.51
LIN54-208ENST00000509748 CTXN1P60606 82 aa18.21■□□□□ 0.51
LIN54-208ENST00000509748 RPS23P62266 143 aaKnown RBP18.21■□□□□ 0.51
LIN54-208ENST00000509748 RIN1Q13671 783 aa18.21■□□□□ 0.51
LIN54-208ENST00000509748 IGFN1Q86VF2 1251 aa18.21■□□□□ 0.51
LIN54-208ENST00000509748 RNF113BQ8IZP6 322 aaKnown RBP18.21■□□□□ 0.51
LIN54-208ENST00000509748 LRRC18Q8N456 261 aa18.21■□□□□ 0.51
LIN54-208ENST00000509748 ZNF540Q8NDQ6 660 aa18.21■□□□□ 0.51
LIN54-208ENST00000509748 CPEB3Q8NE35 698 aaKnown RBP18.21■□□□□ 0.51
LIN54-208ENST00000509748 OR51A7Q8NH64 312 aa18.21■□□□□ 0.51
LIN54-208ENST00000509748 ZNF519Q8TB69 540 aa18.21■□□□□ 0.51
LIN54-208ENST00000509748 MSI2Q96DH6 328 aaKnown RBP18.21■□□□□ 0.51
LIN54-208ENST00000509748 SOX7Q9BT81 388 aa18.21■□□□□ 0.51
LIN54-208ENST00000509748 ALG12Q9BV10 488 aa18.21■□□□□ 0.51
LIN54-208ENST00000509748 M0R233 179 aa18.2■□□□□ 0.5
LIN54-208ENST00000509748 NDUFAB1O14561 156 aa18.2■□□□□ 0.5
LIN54-208ENST00000509748 CDC42EP2O14613 210 aa18.2■□□□□ 0.5
LIN54-208ENST00000509748 LILRA1O75019 489 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms