RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 AQP2P41181 271 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 RAD52P43351 418 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 TMEM33P57088 247 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 HSF2Q03933 536 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 RUNX1T1Q06455 604 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 RPL18Q07020 188 aaKnown RBP13.2□□□□□ -0.3
TPM3-219ENST00000509409 SF3A3Q12874 501 aaKnown RBP eCLIP13.2□□□□□ -0.3
TPM3-219ENST00000509409 TBC1D28Q2M2D7 210 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 RABL3Q5HYI8 236 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 TMEM154Q6P9G4 183 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 HDDC2Q7Z4H3 204 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 LRRC18Q8N456 261 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 RBM15BQ8NDT2 890 aaKnown RBP13.2□□□□□ -0.3
TPM3-219ENST00000509409 SYNPRQ8TBG9 265 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 TMEM255BQ8WV15 326 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 SNX33Q8WV41 574 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 TMEM239Q8WW34 195 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 LRRC58Q96CX6 371 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 ZNF426Q9BUY5 554 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 TMEM120AQ9BXJ8 343 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 C1orf198Q9H425 327 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 INIPQ9NRY2 104 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 RIMS3Q9UJD0 308 aa13.2□□□□□ -0.3
TPM3-219ENST00000509409 B4DSR2 109 aa13.19□□□□□ -0.3
TPM3-219ENST00000509409 TRMUO75648 421 aaKnown RBP13.19□□□□□ -0.3
TPM3-219ENST00000509409 OR5F1O95221 314 aa13.19□□□□□ -0.3
TPM3-219ENST00000509409 SAGP10523 405 aaPredicted RBP13.19□□□□□ -0.3
TPM3-219ENST00000509409 ACADSP16219 412 aa13.19□□□□□ -0.3
TPM3-219ENST00000509409 CCNOP22674 350 aa13.19□□□□□ -0.3
TPM3-219ENST00000509409 APLNRP35414 380 aa13.19□□□□□ -0.3
TPM3-219ENST00000509409 RBM34P42696 430 aaKnown RBP13.19□□□□□ -0.3
TPM3-219ENST00000509409 OR1E2P47887 323 aa13.19□□□□□ -0.3
TPM3-219ENST00000509409 DAP3P51398 398 aaKnown RBP13.19□□□□□ -0.3
TPM3-219ENST00000509409 DVL1P1P54792 670 aaPredicted RBP13.19□□□□□ -0.3
TPM3-219ENST00000509409 UGT2B15P54855 530 aa13.19□□□□□ -0.3
TPM3-219ENST00000509409 KLF3P57682 345 aaPredicted RBP13.19□□□□□ -0.3
TPM3-219ENST00000509409 PIN1Q13526 163 aaPredicted RBP13.19□□□□□ -0.3
TPM3-219ENST00000509409 RINLQ6ZS11 566 aa13.19□□□□□ -0.3
TPM3-219ENST00000509409 PAQR4Q8N4S7 273 aaPredicted RBP13.19□□□□□ -0.3
TPM3-219ENST00000509409 NOXO1Q8NFA2 376 aa13.19□□□□□ -0.3
TPM3-219ENST00000509409 CLDND2Q8NHS1 167 aa13.19□□□□□ -0.3
TPM3-219ENST00000509409 YIPF5Q969M3 257 aa13.19□□□□□ -0.3
TPM3-219ENST00000509409 POLR2J2Q9GZM3 115 aaKnown RBP13.19□□□□□ -0.3
TPM3-219ENST00000509409 POLR2J3Q9H1A7 115 aaKnown RBP13.19□□□□□ -0.3
TPM3-219ENST00000509409 VIPAS39Q9H9C1 493 aa13.19□□□□□ -0.3
TPM3-219ENST00000509409 LPAR2Q9HBW0 351 aa13.19□□□□□ -0.3
TPM3-219ENST00000509409 HINT3Q9NQE9 182 aaKnown RBP13.19□□□□□ -0.3
TPM3-219ENST00000509409 ZNF275Q9NSD4 429 aaPredicted RBP13.19□□□□□ -0.3
TPM3-219ENST00000509409 SLCO1C1Q9NYB5 712 aa13.19□□□□□ -0.3
TPM3-219ENST00000509409 LOC100653049A0A140TA62 436 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 MRASO14807 208 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 TPD52L2O43399 206 aaKnown RBP13.18□□□□□ -0.3
TPM3-219ENST00000509409 TCF21O43680 179 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 KRT34O76011 436 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 TROVE2P10155 538 aaKnown RBP eCLIP13.18□□□□□ -0.3
TPM3-219ENST00000509409 DRD4P21917 467 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 ARFIP2P53365 341 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 CRYBA2P53672 197 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 UCP2P55851 309 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 LAPTM4AQ15012 233 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 SGCAQ16586 387 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 MOGQ16653 247 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 HIST3H3Q16695 136 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 ERICH5Q6P6B1 374 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 GLCCI1Q86VQ1 547 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 CALHM3Q86XJ0 350 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 RFLNBQ8N5W9 214 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 OR8J3Q8NGG0 315 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 MOSPD2Q8NHP6 518 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 ZNF519Q8TB69 540 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 C10orf82Q8WW14 230 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 ASB10Q8WXI3 467 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 NSMAFQ92636 917 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 C1orf159Q96HA4 380 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 TPD52L3Q96J77 140 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 ZNF416Q9BWM5 594 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 MRPL13Q9BYD1 178 aaKnown RBP13.18□□□□□ -0.3
TPM3-219ENST00000509409 BCL2L14Q9BZR8 327 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 CCNB1IP1Q9NPC3 277 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 GID8Q9NWU2 228 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 TREM2Q9NZC2 230 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 STX18Q9P2W9 335 aaKnown RBP13.18□□□□□ -0.3
TPM3-219ENST00000509409 MED31Q9Y3C7 131 aa13.18□□□□□ -0.3
TPM3-219ENST00000509409 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.17□□□□□ -0.38e-7■■■■□ 20.9
TPM3-219ENST00000509409 C17orf100A8MU93 164 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 CENPBD1B2RD01 187 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 MGRN1O60291 552 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 CDC14BO60729 498 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 NPPAP01160 153 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 ZNF250P15622 560 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 CDAP32320 146 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 IFNA8P32881 189 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 MAGEB1P43366 347 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 ERVS71-1P61550 626 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 CCL8P80075 99 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 MRPS11P82912 194 aaKnown RBP13.17□□□□□ -0.3
TPM3-219ENST00000509409 CD47Q08722 323 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 KLF10Q13118 480 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 MAPRE2Q15555 327 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 NRN1LQ496H8 165 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms