RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 CREB3L2Q70SY1 520 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 LDLRAD3Q86YD5 345 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 KLBQ86Z14 1044 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 IGDCC3Q8IVU1 814 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 DDIASQ8IXT1 998 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 LINC00482Q8N8I6 264 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 PTGR2Q8N8N7 351 aaPredicted RBP3.19□□□□□ -1.9
RNF4-211ENST00000509206 PIK3C3Q8NEB9 887 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 SLC30A7Q8NEW0 376 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 BHLHE22Q8NFJ8 381 aaPredicted RBP3.19□□□□□ -1.9
RNF4-211ENST00000509206 OR4F6Q8NGB9 312 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 OR1J1Q8NGS3 322 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 GRK7Q8WTQ7 553 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 GEMIN6Q8WXD5 167 aaKnown RBP3.19□□□□□ -1.9
RNF4-211ENST00000509206 PHF21BQ96EK2 531 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 NEIL1Q96FI4 390 aaPredicted RBP3.19□□□□□ -1.9
RNF4-211ENST00000509206 GPR78Q96P69 363 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 RCHY1Q96PM5 261 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 ATOH8Q96SQ7 321 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 STACQ99469 402 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 PRPF18Q99633 342 aaKnown RBP3.19□□□□□ -1.9
RNF4-211ENST00000509206 NKX3-1Q99801 234 aaPredicted RBP3.19□□□□□ -1.9
RNF4-211ENST00000509206 CITED2Q99967 270 aaPredicted RBP3.19□□□□□ -1.9
RNF4-211ENST00000509206 ELAC2Q9BQ52 826 aaKnown RBP3.19□□□□□ -1.9
RNF4-211ENST00000509206 CCDC106Q9BWC9 280 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 BCL2L14Q9BZR8 327 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 FAM234AQ9H0X4 552 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 GPR35Q9HC97 309 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 RAB18Q9NP72 206 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 B3GAT2Q9NPZ5 323 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 EXD2Q9NVH0 621 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 FAM53CQ9NYF3 392 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 SH3BP4Q9P0V3 963 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 EIF3KQ9UBQ5 218 aaKnown RBP3.19□□□□□ -1.9
RNF4-211ENST00000509206 CLN8Q9UBY8 286 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 ZDHHC8Q9ULC8 765 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 RASD1Q9Y272 281 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 TMED7Q9Y3B3 224 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 IGLV3-9A0A075B6K5 115 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 IQCMA0A1B0GVH7 501 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 TMEM72A0PK05 275 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.18□□□□□ -1.9
RNF4-211ENST00000509206 ZNF879B4DU55 563 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 RPL36A-HNRNPH2H7BZ11 118 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 ETV2O00321 342 aaPredicted RBP3.18□□□□□ -1.9
RNF4-211ENST00000509206 SURF4O15260 269 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 SLC16A6O15403 523 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 ZNF208O43345 1280 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 SMIM24O75264 130 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 ENTPD5O75356 428 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 FARS2O95363 451 aaKnown RBP3.18□□□□□ -1.9
RNF4-211ENST00000509206 IGHV3-13P01766 116 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 THY1P04216 161 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 SERPINA5P05154 406 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 IFI6P09912 130 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 CCL2P13500 99 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 SPRP35270 261 aaPredicted RBP3.18□□□□□ -1.9
RNF4-211ENST00000509206 CFHR2P36980 270 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 IDH2P48735 452 aaKnown RBP3.18□□□□□ -1.9
RNF4-211ENST00000509206 PITPNBP48739 271 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 ANXA11P50995 505 aaKnown RBP3.18□□□□□ -1.9
RNF4-211ENST00000509206 POLR2HP52434 150 aaKnown RBP3.18□□□□□ -1.9
RNF4-211ENST00000509206 MAP2K6P52564 334 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 EFNB2P52799 333 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 AQP5P55064 265 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 UCP2P55851 309 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 ARL4CP56559 192 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 ERVS71-1P61550 626 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 PLP2Q04941 152 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 ZNF763Q0D2J5 394 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 EGFEM1PQ0D2K5 195 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 PMS2P3Q13401 168 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 LASP1Q14847 261 aaKnown RBP3.18□□□□□ -1.9
RNF4-211ENST00000509206 ZMYND11Q15326 602 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 CNN3Q15417 329 aaKnown RBP3.18□□□□□ -1.9
RNF4-211ENST00000509206 MLANAQ16655 118 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 IMPG1Q17R60 797 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 FAM153CQ494X1 144 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 ATP6AP1LQ52LC2 224 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.18□□□□□ -1.9
RNF4-211ENST00000509206 CARD17Q5XLA6 110 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 TMEM53Q6P2H8 277 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 CCDC137Q6PK04 289 aaKnown RBP3.18□□□□□ -1.9
RNF4-211ENST00000509206 LINGO2Q7L985 606 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 RNF130Q86XS8 419 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 VRK2Q86Y07 508 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 CTAGE3PQ8IX95 158 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 ARFGAP2Q8N6H7 521 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 FITM2Q8N6M3 262 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 PNLDC1Q8NA58 520 aaKnown RBP3.18□□□□□ -1.9
RNF4-211ENST00000509206 PAPD5Q8NDF8 572 aaKnown RBP3.18□□□□□ -1.9
RNF4-211ENST00000509206 OR6N1Q8NGY5 312 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 RHEBL1Q8TAI7 183 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 METTL6Q8TCB7 284 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 TFAP2CQ92754 450 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 ZNF524Q96C55 264 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 ISOC1Q96CN7 298 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 SLC25A36Q96CQ1 311 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 APIPQ96GX9 242 aa3.18□□□□□ -1.9
RNF4-211ENST00000509206 UBXN10Q96LJ8 280 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms