RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 DEF8Q6ZN54 512 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 CCDC80Q76M96 950 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 NKAIN4Q8IVV8 208 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 LRRC18Q8N456 261 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 ICA1LQ8NDH6 482 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 PFN4Q8NHR9 129 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 SYNPRQ8TBG9 265 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 TMEM255BQ8WV15 326 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 SNX33Q8WV41 574 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 RASSF5Q8WWW0 418 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 ASB10Q8WXI3 467 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 TMEM186Q96B77 213 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 C1orf198Q9H425 327 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 METTL17Q9H7H0 456 aaPredicted RBP9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 HINT3Q9NQE9 182 aaKnown RBP9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 INIPQ9NRY2 104 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 HIF1ANQ9NWT6 349 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 GPR160Q9UJ42 338 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 METRNQ9UJH8 293 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 SH3GLB1Q9Y371 365 aa9.87□□□□□ -0.83
HMGCS1-204ENST00000507293 IGLV3-9A0A075B6K5 115 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 A0A0G2JND7 137 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 IQCMA0A1B0GVH7 501 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 HMGB1P1B2RPK0 211 aaPredicted RBP9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 FBP2O00757 339 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 CDC14BO60729 498 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 EDF1O60869 148 aaKnown RBP9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 SHOX2O60902 331 aaPredicted RBP9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 TRMUO75648 421 aaKnown RBP9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 SNAP29O95721 258 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 PTHP01270 115 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 MT-ND1P03886 318 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 MMP7P09237 267 aaPredicted RBP9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 ZNF250P15622 560 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 ACADSP16219 412 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 FUT1P19526 365 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 AQP2P41181 271 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 RBM34P42696 430 aaKnown RBP9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 DAP3P51398 398 aaKnown RBP9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 TMEM33P57088 247 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 TAS2R41P59536 307 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 SELENOVP59797 346 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 CCL8P80075 99 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 HSF2Q03933 536 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 GLO1Q04760 184 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 PLP2Q04941 152 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 NRN1LQ496H8 165 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 RABL3Q5HYI8 236 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 NANOGP8Q6NSW7 305 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 TMEM154Q6P9G4 183 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 HDDC2Q7Z4H3 204 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 SYT14Q8NB59 555 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 OR1J2Q8NGS2 313 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 OR51F2Q8NH61 342 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 MOSPD2Q8NHP6 518 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 ZNF519Q8TB69 540 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 C11orf40Q8WZ69 217 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 GTF3AQ92664 365 aaKnown RBP9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 SGTBQ96EQ0 304 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 LRRC37BQ96QE4 947 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 SEPHS2Q99611 448 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 MRPL13Q9BYD1 178 aaKnown RBP9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 OCEL1Q9H607 264 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 NANOGQ9H9S0 305 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 C20orf141Q9NUB4 165 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 SLCO1C1Q9NYB5 712 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 GRIP1Q9Y3R0 1128 aa9.86□□□□□ -0.83
HMGCS1-204ENST00000507293 CENPBD1B2RD01 187 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 FXYD1O00168 92 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 OR5F1O95221 314 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 SLC2A10O95528 541 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 CDAP32320 146 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 APLNRP35414 380 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 RAD52P43351 418 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 ZNF133P52736 654 aaPredicted RBP9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 UCP2P55851 309 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 LMO4P61968 165 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 MVKQ03426 396 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 CYLC2Q14093 348 aaPredicted RBP9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 PCGF3Q3KNV8 242 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 PABPC1L2AQ5JQF8 200 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 C10orf128Q5T292 105 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 AVPI1Q5T686 147 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 SHQ1Q6PI26 577 aaKnown RBP9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 CALHM3Q86XJ0 350 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 MEX3DQ86XN8 651 aaKnown RBP9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 CPEB3Q8NE35 698 aaKnown RBP9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 OR1J1Q8NGS3 322 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 TMEM239Q8WW34 195 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 SIKE1Q9BRV8 207 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 BCL2L14Q9BZR8 327 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 LRMDAQ9H2I8 198 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 CCNB1IP1Q9NPC3 277 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 ARGLU1Q9NWB6 273 aaPredicted RBP9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 RIMS3Q9UJD0 308 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 BAG5Q9UL15 447 aa9.85□□□□□ -0.83
HMGCS1-204ENST00000507293 IGKV1D-43A0A0B4J1Z2 117 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 IGHV1-69-2A0A0G2JMI3 117 aa9.84□□□□□ -0.83
HMGCS1-204ENST00000507293 MRASO14807 208 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms