RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 DDB2Q92466 427 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 TECTBQ96PL2 329 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 RCHY1Q96PM5 261 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 OR5M11Q96RB7 305 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 SIGLEC11Q96RL6 698 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 ZNF382Q96SR6 550 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 NKX3-1Q99801 234 aaPredicted RBP5.93□□□□□ -1.46
VCAN-207ENST00000507162 ULBP2Q9BZM5 246 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 OR2J1Q9GZK6 312 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 ZNRD1Q9P1U0 126 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 EIF3KQ9UBQ5 218 aaKnown RBP5.93□□□□□ -1.46
VCAN-207ENST00000507162 CAB39Q9Y376 341 aaPredicted RBP5.93□□□□□ -1.46
VCAN-207ENST00000507162 WDR45Q9Y484 360 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 HUWE1Q7Z6Z7 4374 aaKnown RBP5.92□□□□□ -1.46
VCAN-207ENST00000507162 FRAS1Q86XX4 4008 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 DUXAA6NLW8 204 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 ZNF726A6NNF4 738 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 A8MT66 165 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.92□□□□□ -1.46
VCAN-207ENST00000507162 TIMM8AO60220 97 aaPredicted RBP5.92□□□□□ -1.46
VCAN-207ENST00000507162 MFN2O95140 757 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 AHSA1O95433 338 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 C6orf47O95873 294 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 AK1P00568 194 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 ENO1P06733 434 aaKnown RBP5.92□□□□□ -1.46
VCAN-207ENST00000507162 LIPFP07098 398 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 UQCRBP14927 111 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 FAHP16930 419 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 CBLP22681 906 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 APLNRP35414 380 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 SOAT1P35610 550 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 RPS5P46782 204 aaKnown RBP5.92□□□□□ -1.46
VCAN-207ENST00000507162 FOXA1P55317 472 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 ETF1P62495 437 aaKnown RBP5.92□□□□□ -1.46
VCAN-207ENST00000507162 XKR7Q5GH72 579 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 ZMAT1Q5H9K5 638 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 FAM201AQ5SY85 155 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 CYS1Q717R9 158 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 ZNF627Q7L945 461 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 TMEM139Q8IV31 216 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 KLHL7Q8IXQ5 586 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 TMEM123Q8N131 208 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 SLC22A24Q8N4F4 322 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 HIPK4Q8NE63 616 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 OR7A2PQ8NGA2 310 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 C8orf46Q8TAG6 207 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 ZNF420Q8TAQ5 688 aaPredicted RBP5.92□□□□□ -1.46
VCAN-207ENST00000507162 PNPT1Q8TCS8 783 aaKnown RBP5.92□□□□□ -1.46
VCAN-207ENST00000507162 KLF14Q8TD94 323 aaPredicted RBP5.92□□□□□ -1.46
VCAN-207ENST00000507162 TFAP2CQ92754 450 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 TXNDC15Q96J42 360 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 DCTN5Q9BTE1 182 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 RRAGDQ9NQL2 400 aaPredicted RBP5.92□□□□□ -1.46
VCAN-207ENST00000507162 EXOSC3Q9NQT5 275 aaKnown RBP5.92□□□□□ -1.46
VCAN-207ENST00000507162 B3GAT1Q9P2W7 334 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 DNAJB11Q9UBS4 358 aa5.92□□□□□ -1.46
VCAN-207ENST00000507162 IGHV3-64DA0A0J9YX35 117 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 HMX2A2RU54 273 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 CFAP73A6NFT4 308 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 NPIPB8E9PQR5 432 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 H3BUX3 64 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 TBX19O60806 448 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 CRCPO75575 148 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 SASH3O75995 380 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 SEC31AO94979 1220 aaKnown RBP5.91□□□□□ -1.46
VCAN-207ENST00000507162 FARS2O95363 451 aaKnown RBP5.91□□□□□ -1.46
VCAN-207ENST00000507162 SNAP29O95721 258 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 LAMP1P11279 417 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 HLA-DOBP13765 273 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 ZNF26P17031 533 aaPredicted RBP5.91□□□□□ -1.46
VCAN-207ENST00000507162 ACAA2P42765 397 aaKnown RBP5.91□□□□□ -1.46
VCAN-207ENST00000507162 SERPINB8P50452 374 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 ANXA11P50995 505 aaKnown RBP5.91□□□□□ -1.46
VCAN-207ENST00000507162 HSF2Q03933 536 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 PRB3Q04118 309 aaPredicted RBP5.91□□□□□ -1.46
VCAN-207ENST00000507162 HABP2Q14520 560 aaPredicted RBP5.91□□□□□ -1.46
VCAN-207ENST00000507162 GSTA3Q16772 222 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 LSM12Q3MHD2 195 aaKnown RBP5.91□□□□□ -1.46
VCAN-207ENST00000507162 MTX3Q5HYI7 312 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 TCTEX1D4Q5JR98 221 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 ZNF678Q5SXM1 525 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 ATAD3BQ5T9A4 648 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 MBNL2Q5VZF2 373 aaKnown RBP5.91□□□□□ -1.46
VCAN-207ENST00000507162 CD276Q5ZPR3 534 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 TYW3Q6IPR3 259 aaKnown RBP5.91□□□□□ -1.46
VCAN-207ENST00000507162 C6orf120Q7Z4R8 191 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 UEVLDQ8IX04 471 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 CLEC4FQ8N1N0 589 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 TMEM151AQ8N4L1 468 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 PNLDC1Q8NA58 520 aaKnown RBP5.91□□□□□ -1.46
VCAN-207ENST00000507162 RBM15BQ8NDT2 890 aaKnown RBP5.91□□□□□ -1.46
VCAN-207ENST00000507162 MFSD8Q8NHS3 518 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 OR5P2Q8WZ92 322 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 LRR1Q96L50 414 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 MAGEB18Q96M61 343 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 MRPL57Q9BQC6 102 aaKnown RBP5.91□□□□□ -1.46
VCAN-207ENST00000507162 C1QTNF3Q9BXJ4 246 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 GPR61Q9BZJ8 451 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 ZNF350Q9GZX5 532 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 SIRPDQ9H106 197 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms