RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 LRRC18Q8N456 261 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 SLC22A24Q8N4F4 322 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 SCAIQ8N9R8 606 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 RBM15BQ8NDT2 890 aaKnown RBP4.88□□□□□ -1.63
GYPB-208ENST00000507009 OR4K5Q8NGD3 323 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 ZNF519Q8TB69 540 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 SLC38A5Q8WUX1 472 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 MAL2Q969L2 176 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 UBE2FQ969M7 185 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 TMIGD2Q96BF3 282 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 MOGAT1Q96PD6 335 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 KRTAP4-12Q9BQ66 201 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 LRMDAQ9H2I8 198 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 NPHS2Q9NP85 383 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 MKS1Q9NXB0 559 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 DCAF16Q9NXF7 216 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 SLCO1C1Q9NYB5 712 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 PLEK2Q9NYT0 353 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 PDP1Q9P0J1 537 aaPredicted RBP4.88□□□□□ -1.63
GYPB-208ENST00000507009 KLHL14Q9P2G3 628 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 PURGQ9UJV8 347 aaKnown RBP4.88□□□□□ -1.63
GYPB-208ENST00000507009 FBXL3Q9UKT7 428 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 IFT52Q9Y366 437 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 CHST2Q9Y4C5 530 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 DSPPQ9NZW4 1301 aa4.88□□□□□ -1.63
GYPB-208ENST00000507009 A0A0G2JPF8 293 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 HNRNPCL2B2RXH8 293 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 HNRNPCL3B7ZW38 293 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 TRAPPC2LH3BP13 241 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 KPNA4O00629 521 aaPredicted RBP4.87□□□□□ -1.63
GYPB-208ENST00000507009 HOXA3O43365 443 aaPredicted RBP4.87□□□□□ -1.63
GYPB-208ENST00000507009 RNF13O43567 381 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 HNRNPCL1O60812 293 aaKnown RBP4.87□□□□□ -1.63
GYPB-208ENST00000507009 FARS2O95363 451 aaKnown RBP4.87□□□□□ -1.63
GYPB-208ENST00000507009 BGLAPP02818 100 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 RNASE1P07998 156 aaKnown RBP4.87□□□□□ -1.63
GYPB-208ENST00000507009 ALDOCP09972 364 aaKnown RBP4.87□□□□□ -1.63
GYPB-208ENST00000507009 HNRNPCL4P0DMR1 293 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 IGHV4-38-2P0DP08 117 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 KITP10721 976 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 ZNF250P15622 560 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 HTR2AP28223 471 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 GCH1P30793 250 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 MTNR1AP48039 350 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 SLC1A6P48664 564 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 RPL14P50914 215 aaKnown RBP4.87□□□□□ -1.63
GYPB-208ENST00000507009 CLRN1P58418 232 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 LRRC74AQ0VAA2 488 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 ZNF154Q13106 437 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 MOGQ16653 247 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 ZNF718Q3SXZ3 478 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 MMEL1Q495T6 779 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 SPRNQ5BIV9 151 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 WDR88Q6ZMY6 472 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 PIWIL3Q7Z3Z3 882 aaKnown RBP4.87□□□□□ -1.63
GYPB-208ENST00000507009 HIPK4Q8NE63 616 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 DEFB108BQ8NET1 73 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 OR52E2Q8NGJ4 325 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 OR1J2Q8NGS2 313 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 NFKBIDQ8NI38 313 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 IPCEF1Q8WWN9 437 aaPredicted RBP4.87□□□□□ -1.63
GYPB-208ENST00000507009 POP5Q969H6 163 aaKnown RBP4.87□□□□□ -1.63
GYPB-208ENST00000507009 ZNF566Q969W8 418 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 VPS33AQ96AX1 596 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 TRIM44Q96DX7 344 aaPredicted RBP4.87□□□□□ -1.63
GYPB-208ENST00000507009 SLC47A1Q96FL8 570 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 LRR1Q96L50 414 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 EPYCQ99645 322 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 PAIP2Q9BPZ3 127 aaKnown RBP4.87□□□□□ -1.63
GYPB-208ENST00000507009 EGLN1Q9GZT9 426 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 WDR55Q9H6Y2 383 aaPredicted RBP4.87□□□□□ -1.63
GYPB-208ENST00000507009 ZMAT3Q9HA38 289 aaKnown RBP4.87□□□□□ -1.63
GYPB-208ENST00000507009 PPCSQ9HAB8 311 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 MSL2Q9HCI7 577 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 PNPOQ9NVS9 261 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 AIG1Q9NVV5 245 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 NKIRAS2Q9NYR9 191 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 GLTPQ9NZD2 209 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 RAP2CQ9Y3L5 183 aa4.87□□□□□ -1.63
GYPB-208ENST00000507009 TANC2Q9HCD6 1990 aa4.86□□□□□ -1.63
GYPB-208ENST00000507009 IGLV3-9A0A075B6K5 115 aa4.86□□□□□ -1.63
GYPB-208ENST00000507009 TRAV40A0A0B4J280 105 aa4.86□□□□□ -1.63
GYPB-208ENST00000507009 C5orf49A4QMS7 147 aa4.86□□□□□ -1.63
GYPB-208ENST00000507009 ZSCAN5BA6NJL1 495 aa4.86□□□□□ -1.63
GYPB-208ENST00000507009 M0QZ24 198 aa4.86□□□□□ -1.63
GYPB-208ENST00000507009 PLPP3O14495 311 aa4.86□□□□□ -1.63
GYPB-208ENST00000507009 DHHO43323 396 aa4.86□□□□□ -1.63
GYPB-208ENST00000507009 TIMM8AO60220 97 aaPredicted RBP4.86□□□□□ -1.63
GYPB-208ENST00000507009 UBOX5O94941 541 aa4.86□□□□□ -1.63
GYPB-208ENST00000507009 ZNF205O95201 554 aa4.86□□□□□ -1.63
GYPB-208ENST00000507009 TGDSO95455 350 aa4.86□□□□□ -1.63
GYPB-208ENST00000507009 PTHP01270 115 aa4.86□□□□□ -1.63
GYPB-208ENST00000507009 IGHMP01871 453 aa4.86□□□□□ -1.63
GYPB-208ENST00000507009 SERPINE1P05121 402 aa4.86□□□□□ -1.63
GYPB-208ENST00000507009 QDPRP09417 244 aa4.86□□□□□ -1.63
GYPB-208ENST00000507009 UMPSP11172 480 aa4.86□□□□□ -1.63
GYPB-208ENST00000507009 ZNF12P17014 697 aa4.86□□□□□ -1.63
GYPB-208ENST00000507009 BGNP21810 368 aa4.86□□□□□ -1.63
GYPB-208ENST00000507009 EPHA3P29320 983 aa4.86□□□□□ -1.63
GYPB-208ENST00000507009 AQP1P29972 269 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms