RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 PIGTQ969N2 578 aa6.35□□□□□ -1.39
GYPB-206ENST00000506516 MCHR2Q969V1 340 aa6.35□□□□□ -1.39
GYPB-206ENST00000506516 RSRC1Q96IZ7 334 aaKnown RBP6.35□□□□□ -1.39
GYPB-206ENST00000506516 FOXB1Q99853 325 aa6.35□□□□□ -1.39
GYPB-206ENST00000506516 KCNS3Q9BQ31 491 aa6.35□□□□□ -1.39
GYPB-206ENST00000506516 FUZQ9BT04 418 aa6.35□□□□□ -1.39
GYPB-206ENST00000506516 ALG12Q9BV10 488 aa6.35□□□□□ -1.39
GYPB-206ENST00000506516 MRPL13Q9BYD1 178 aaKnown RBP6.35□□□□□ -1.39
GYPB-206ENST00000506516 KCNN2Q9H2S1 579 aa6.35□□□□□ -1.39
GYPB-206ENST00000506516 LIME1Q9H400 295 aa6.35□□□□□ -1.39
GYPB-206ENST00000506516 DENND2DQ9H6A0 471 aaPredicted RBP6.35□□□□□ -1.39
GYPB-206ENST00000506516 ITGB1BP2Q9UKP3 347 aa6.35□□□□□ -1.39
GYPB-206ENST00000506516 SAMHD1Q9Y3Z3 626 aaKnown RBP6.35□□□□□ -1.39
GYPB-206ENST00000506516 LYVE1Q9Y5Y7 322 aa6.35□□□□□ -1.39
GYPB-206ENST00000506516 CENPEQ02224 2701 aa6.35□□□□□ -1.39
GYPB-206ENST00000506516 CACNA1CQ13936 2221 aa6.35□□□□□ -1.39
GYPB-206ENST00000506516 FBN2P35556 2912 aa6.35□□□□□ -1.39
GYPB-206ENST00000506516 UNC79Q9P2D8 2635 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 VSTM5A8MXK1 200 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 F8W735 103 aaPredicted RBP6.34□□□□□ -1.39
GYPB-206ENST00000506516 IMPA2O14732 288 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 HS3ST1O14792 307 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 CIB2O75838 187 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 CRYAAP02489 173 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 OR8G3PP0DMU2 310 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 CD79AP11912 226 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 CBR1P16152 277 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 NPR2P20594 1047 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 FPR3P25089 353 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 LOXP28300 417 aaPredicted RBP6.34□□□□□ -1.39
GYPB-206ENST00000506516 LIMS1P48059 325 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 ERVK-25P63136 954 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 CBX1P83916 185 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 MYBPC1Q00872 1141 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 RUNX1T1Q06455 604 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 PIGFQ07326 219 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 CD47Q08722 323 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 TSPAN31Q12999 210 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 FHL1Q13642 323 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 MICAQ29983 383 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 RFX4Q33E94 735 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 C3orf36Q3SXR2 165 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 NRN1LQ496H8 165 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 ZNF672Q499Z4 452 aaPredicted RBP6.34□□□□□ -1.39
GYPB-206ENST00000506516 GPR139Q6DWJ6 353 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 RPL13AP3Q6NVV1 102 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 SLC22A25Q6T423 547 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 PAMR1Q6UXH9 720 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 DPPA2Q7Z7J5 298 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 IGFN1Q86VF2 1251 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 WDFY1Q8IWB7 410 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 ADGRG5Q8IZF4 528 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 SLC22A24Q8N4F4 322 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 ARIH2OSQ8N7S6 290 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 ZNF611Q8N823 705 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 NOXO1Q8NFA2 376 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 CANT1Q8WVQ1 401 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 NRGNQ92686 78 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 HDAC2Q92769 488 aaKnown RBP6.34□□□□□ -1.39
GYPB-206ENST00000506516 FBXW5Q969U6 566 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 ZNF570Q96NI8 536 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 TSPAN32Q96QS1 320 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 KATNB1Q9BVA0 655 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 LRMDAQ9H2I8 198 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 SIAEQ9HAT2 523 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 SMURF2Q9HAU4 748 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 NRIP3Q9NQ35 241 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 CCM2LQ9NUG4 571 aaPredicted RBP6.34□□□□□ -1.39
GYPB-206ENST00000506516 FAIMQ9NVQ4 179 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 CISD1Q9NZ45 108 aaKnown RBP6.34□□□□□ -1.39
GYPB-206ENST00000506516 NPAP1Q9NZP6 1156 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 SLC7A8Q9UHI5 535 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 POU2F3Q9UKI9 436 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 FBXL3Q9UKT7 428 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 SIGLEC7Q9Y286 467 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 PLEKHA6Q9Y2H5 1048 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 U3KQV3 271 aa6.34□□□□□ -1.39
GYPB-206ENST00000506516 CSMD2Q7Z408 3487 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 IGHV1-18A0A0C4DH31 117 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 A0A1W2PPR1 153 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 TCRBV3S1A0A5B6 114 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 IDH3BO43837 385 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 TMCC2O75069 709 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 E2F6O75461 281 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 ALX3O95076 343 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 UBL3O95164 117 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 RAB36O95755 333 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 PLAUP00749 431 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 PTHP01270 115 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 GASTP01350 101 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 IGKV3-15P01624 115 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 HLA-HP01893 362 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 APEHP13798 732 aaKnown RBP6.33□□□□□ -1.4
GYPB-206ENST00000506516 B4GALT1P15291 398 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 GSTM3P21266 225 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 NOS3P29474 1203 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 SDHAP31040 664 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 SLC6A6P31641 620 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 GSSP48637 474 aa6.33□□□□□ -1.4
GYPB-206ENST00000506516 ZNF133P52736 654 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms