RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 HLA-HP01893 362 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 GYPCP04921 128 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 OCMP0CE72 109 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 MLNP12872 115 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 PGAM1P18669 254 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 ATP5A1P25705 553 aaKnown RBP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 IFNA8P32881 189 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 SAA4P35542 130 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 UGT2B10P36537 528 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 RPL4P36578 427 aaKnown RBP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 ACVR1BP36896 505 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 SLC1A1P43005 524 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 XCR1P46094 333 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 CSNK1A1P48729 337 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 CCR8P51685 355 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 CCL23P55773 120 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 UBE2KP61086 200 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 ADARB1P78563 741 aaKnown RBP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 SP4Q02446 784 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 TRAF2Q12933 501 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 EMC2Q15006 297 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 RAB35Q15286 201 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 KCTD19Q17RG1 926 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 GTDC1Q4AE62 458 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 FAM106AQ4KMX7 169 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 ZCWPW2Q504Y3 356 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 COQ5Q5HYK3 327 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 LCE5AQ5TCM9 118 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 PCSK4Q6UW60 755 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 TMEM207Q6UWW9 146 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 FAM151BQ6UXP7 276 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 C9orf139Q6ZV77 190 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 FCRLAQ7L513 359 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 FUNDC1Q8IVP5 155 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 OR2L13Q8N349 312 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 FAM89BQ8N5H3 189 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 JAGN1Q8N5M9 183 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 GVQW1Q8N7I0 195 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 TPRX1Q8N7U7 411 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 CDRT4Q8N9R6 151 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 TTC29Q8NA56 475 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 ZSCAN4Q8NAM6 433 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 TTLQ8NG68 377 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 OR2L8Q8NGY9 312 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 LYPD6BQ8NI32 183 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 AENQ8WTP8 325 aaKnown RBP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 FCAMRQ8WWV6 532 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 TM9SF4Q92544 642 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 ZNF689Q96CS4 500 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 C9orf72Q96LT7 481 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 NSMCE3Q96MG7 304 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 KCNA7Q96RP8 456 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 FEM1AQ9BSK4 669 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 KRTAP9-3Q9BYQ3 159 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 ACTR3CQ9C0K3 210 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 SRRQ9GZT4 340 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 CHRNA10Q9GZZ6 450 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 PLAC1Q9HBJ0 212 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 FGF20Q9NP95 211 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 TREX1Q9NSU2 369 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 ABCD2Q9UBJ2 740 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 ELF5Q9UKW6 265 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 AGO1Q9UL18 857 aaKnown RBP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 TCF19Q9Y242 345 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 SLC17A4Q9Y2C5 497 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 COQ4Q9Y3A0 265 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 OARD1Q9Y530 152 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 STYXL1Q9Y6J8 313 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 MYO7AQ13402 2215 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 CACNA1HO95180 2353 aa3.67□□□□□ -1.82
HMGB1P21-201ENST00000502313 IGLV9-49A0A0B4J1Y8 123 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 A0A1B0GUA9 196 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 LINC01553A4QN01 128 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 CLEC18AA5D8T8 446 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 ASPDHA6ND91 283 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 CCDC182A6NF36 153 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 OR6C70A6NIJ9 312 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 C5orf67F2Z3F1 127 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 M0QXV9 152 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 LIN7AO14910 233 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 PPP1R2P9O14990 202 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 RGS14O43566 566 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 ZNF189O75820 626 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 GAGE7O76087 117 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 FADS2O95864 444 aaKnown RBP3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 ALDOBP05062 364 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 DCNP07585 359 aaKnown RBP3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 CELA2AP08217 269 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 GAGE12FP0CL80 117 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 GAGE12GP0CL81 117 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 GAGE12IP0CL82 117 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 MGMTP16455 207 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 HOXD3P31249 432 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 UGT1A3P35503 534 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 CSKP41240 450 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 CDKN2CP42773 168 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 AMTP48728 403 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 GDI2P50395 445 aaKnown RBP3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 KPNA2P52292 529 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms