RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 TCP10LQ8TDR4 215 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 OR52E6Q96RD3 313 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 ASPNQ9BXN1 380 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 EGLN1Q9GZT9 426 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 PRDM13Q9H4Q3 707 aa13.13□□□□□ -0.31
HDAC6-236ENST00000498808 TRAV40A0A0B4J280 105 aa13.12□□□□□ -0.31
HDAC6-236ENST00000498808 CLPSL1A2RUU4 121 aa13.12□□□□□ -0.31
HDAC6-236ENST00000498808 PLPP3O14495 311 aa13.12□□□□□ -0.31
HDAC6-236ENST00000498808 NDUFA7O95182 113 aa13.12□□□□□ -0.31
HDAC6-236ENST00000498808 BPGMP07738 259 aa13.12□□□□□ -0.31
HDAC6-236ENST00000498808 ALDOCP09972 364 aaKnown RBP13.12□□□□□ -0.31
HDAC6-236ENST00000498808 SELEP16581 610 aa13.12□□□□□ -0.31
HDAC6-236ENST00000498808 AHCYP23526 432 aa13.12□□□□□ -0.31
HDAC6-236ENST00000498808 PAX2Q02962 417 aa13.12□□□□□ -0.31
HDAC6-236ENST00000498808 DEFB112Q30KQ8 113 aa13.12□□□□□ -0.31
HDAC6-236ENST00000498808 TMEM155Q4W5P6 130 aa13.12□□□□□ -0.31
HDAC6-236ENST00000498808 THEM4Q5T1C6 240 aa13.12□□□□□ -0.31
HDAC6-236ENST00000498808 FIP1L1Q6UN15 594 aaKnown RBP13.12□□□□□ -0.31
HDAC6-236ENST00000498808 KLHL36Q8N4N3 616 aa13.12□□□□□ -0.31
HDAC6-236ENST00000498808 CPEB3Q8NE35 698 aaKnown RBP13.12□□□□□ -0.31
HDAC6-236ENST00000498808 UBLCP1Q8WVY7 318 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-236ENST00000498808 DNAJA4Q8WW22 397 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-236ENST00000498808 UPRTQ96BW1 309 aa13.12□□□□□ -0.31
HDAC6-236ENST00000498808 MARS2Q96GW9 593 aaKnown RBP13.12□□□□□ -0.31
HDAC6-236ENST00000498808 CACYBPQ9HB71 228 aaKnown RBP13.12□□□□□ -0.31
HDAC6-236ENST00000498808 TNFRSF19Q9NS68 423 aa13.12□□□□□ -0.31
HDAC6-236ENST00000498808 IQCMA0A1B0GVH7 501 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 PLSCR5A0PG75 271 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 SLC22A31A6NKX4 558 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 SRRM5B3KS81 715 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 C11orf98E9PRG8 122 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 DHHO43323 396 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 ENTPD5O75356 428 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 FARS2O95363 451 aaKnown RBP13.11□□□□□ -0.31
HDAC6-236ENST00000498808 PTHP01270 115 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 CD55P08174 381 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 MMP7P09237 267 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-236ENST00000498808 PPIAL4GP0DN37 164 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 LBPP18428 481 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 WNT5AP41221 380 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 ZNF718Q3SXZ3 478 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 SLC36A2Q495M3 483 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 SLC16A14Q7RTX9 510 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 DPPA2Q7Z7J5 298 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 LRRC28Q86X40 367 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-236ENST00000498808 RBM15BQ8NDT2 890 aaKnown RBP13.11□□□□□ -0.31
HDAC6-236ENST00000498808 OR6X1Q8NH79 312 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 LRMDAQ9H2I8 198 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 MARCH7Q9H992 704 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 TMEM106BQ9NUM4 274 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 OR5V1Q9UGF6 321 aa13.11□□□□□ -0.31
HDAC6-236ENST00000498808 RFXANKO14593 260 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 CRYBA1P05813 215 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 NUDT7P0C024 238 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 CCNOP22674 350 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 APLNRP35414 380 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 PLP2Q04941 152 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 LRRC74AQ0VAA2 488 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 ZMYND11Q15326 602 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 TAF9Q16594 264 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 GTDC1Q4AE62 458 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 PDCD4Q53EL6 469 aaKnown RBP13.1□□□□□ -0.31
HDAC6-236ENST00000498808 ESCO2Q56NI9 601 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 MBNL2Q5VZF2 373 aaKnown RBP13.1□□□□□ -0.31
HDAC6-236ENST00000498808 FAM91A1Q658Y4 838 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 ULK3Q6PHR2 472 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 SLC25A40Q8TBP6 338 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 KLF14Q8TD94 323 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-236ENST00000498808 VPS33AQ96AX1 596 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 SLC47A1Q96FL8 570 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 C16orf45Q96MC5 204 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-236ENST00000498808 EPYCQ99645 322 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 CHIAQ9BZP6 476 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 OR2J1Q9GZK6 312 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 C20orf27Q9GZN8 174 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 TPT1P8Q9HAU6 139 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 MSL2Q9HCI7 577 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 BCL2L10Q9HD36 194 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 AIG1Q9NVV5 245 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 KLHL21Q9UJP4 597 aa13.1□□□□□ -0.31
HDAC6-236ENST00000498808 MYZAPP0CAP1 466 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 ADORA3P0DMS8 318 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 BTG1P62324 171 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 TNFAIP6P98066 277 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-236ENST00000498808 MELKQ14680 651 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 HLXQ14774 488 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-236ENST00000498808 OGFOD2Q6N063 350 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 BRD3OSQ6XYD6 125 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 Q6ZPA2 131 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 SLC35D2Q76EJ3 337 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 POU5F2Q8N7G0 328 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 ZNF283Q8N7M2 679 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 OR5J2Q8NH18 312 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 MAL2Q969L2 176 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 ZDHHC16Q969W1 377 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 ZNF566Q969W8 418 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 DACT3Q96B18 629 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-236ENST00000498808 SIGLEC11Q96RL6 698 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 ARHGDIGQ99819 225 aa13.09□□□□□ -0.31
HDAC6-236ENST00000498808 NUF2Q9BZD4 464 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms