RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CECR9P0C854 216 aa13.34□□□□□ -0.27
NUP50-219ENST00000497960 FUT1P19526 365 aa13.34□□□□□ -0.27
NUP50-219ENST00000497960 MAKP20794 623 aa13.34□□□□□ -0.27
NUP50-219ENST00000497960 FASP25445 335 aa13.34□□□□□ -0.27
NUP50-219ENST00000497960 ARR3P36575 388 aa13.34□□□□□ -0.27
NUP50-219ENST00000497960 LIMS1P48059 325 aa13.34□□□□□ -0.27
NUP50-219ENST00000497960 NAAAQ02083 359 aa13.34□□□□□ -0.27
NUP50-219ENST00000497960 TNK1Q13470 666 aa13.34□□□□□ -0.27
NUP50-219ENST00000497960 LAPTM4AQ15012 233 aa13.34□□□□□ -0.27
NUP50-219ENST00000497960 RAB35Q15286 201 aa13.34□□□□□ -0.27
NUP50-219ENST00000497960 C11orf71Q6IPW1 123 aa13.34□□□□□ -0.27
NUP50-219ENST00000497960 ZNF813Q6ZN06 617 aa13.34□□□□□ -0.27
NUP50-219ENST00000497960 Q71RC1 249 aaPredicted RBP13.34□□□□□ -0.27
NUP50-219ENST00000497960 OR9Q2Q8NGE9 314 aa13.34□□□□□ -0.27
NUP50-219ENST00000497960 OR4C15Q8NGM1 316 aa13.34□□□□□ -0.27
NUP50-219ENST00000497960 OR13C2Q8NGS9 318 aa13.34□□□□□ -0.27
NUP50-219ENST00000497960 OR6X1Q8NH79 312 aa13.34□□□□□ -0.27
NUP50-219ENST00000497960 GDF2Q9UK05 429 aaPredicted RBP13.34□□□□□ -0.27
NUP50-219ENST00000497960 PMF1-BGLAPU3KQ54 211 aa13.34□□□□□ -0.27
NUP50-219ENST00000497960 ZNF469Q96JG9 3925 aaPredicted RBP13.34□□□□□ -0.27
NUP50-219ENST00000497960 HIVEP2P31629 2446 aa13.33□□□□□ -0.27
NUP50-219ENST00000497960 TRAV27A0A087WT01 109 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 BLOC1S5-TXNDC5H3BN57 136 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 NDUFS7O75251 213 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 ENTPD5O75356 428 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 SEC14L2O76054 403 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 LY6G6DO95868 133 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 BCL10O95999 233 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 IGKV3-15P01624 115 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 HEXAP06865 529 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 ACVR1BP36896 505 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 OMPP47874 163 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 SLC9A3P48764 834 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 IDH3GP51553 393 aaPredicted RBP13.33□□□□□ -0.28
NUP50-219ENST00000497960 NUDT6P53370 316 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 NPRL3Q12980 569 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 ATP6AP1Q15904 470 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 OAFQ86UD1 273 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 LINC00471Q8N535 108 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 OR4F15Q8NGB8 312 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 OR10G2Q8NGC3 310 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 NANOS1Q8WY41 292 aaKnown RBP13.33□□□□□ -0.28
NUP50-219ENST00000497960 LRTOMTQ8WZ04 291 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 ZNF566Q969W8 418 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 SLC25A44Q96H78 314 aaPredicted RBP13.33□□□□□ -0.28
NUP50-219ENST00000497960 FOXB1Q99853 325 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 NDEL1Q9GZM8 345 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 GLTPQ9NZD2 209 aa13.33□□□□□ -0.28
NUP50-219ENST00000497960 A0A1W2PRG6 482 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 VSTM5A8MXK1 200 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 CDC42EP2O14613 210 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 SSX4O60224 188 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 CD79AP11912 226 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 HMGA2P52926 109 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 MELKQ14680 651 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 TAF11Q15544 211 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 MICAQ29983 383 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 PGBD2Q6P3X8 592 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 TMPRSS11FQ6ZWK6 438 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 HDDC2Q7Z4H3 204 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 MDP1Q86V88 176 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 AQP11Q8NBQ7 271 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 IL17RDQ8NFM7 739 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 FANK1Q8TC84 345 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 GNPDA2Q8TDQ7 276 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 GIPC3Q8TF64 312 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 LIPHQ8WWY8 451 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 TMEM54Q969K7 222 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 FBXO17Q96EF6 278 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 CA10Q9NS85 328 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 KIF17Q9P2E2 1029 aa13.32□□□□□ -0.28
NUP50-219ENST00000497960 ZFHX3Q15911 3703 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 UNC119BA6NIH7 251 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 MCIDASD6RGH6 385 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 RNF223E7ERA6 249 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 H7C417 338 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 IGHG1P01857 330 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 HLA-HP01893 362 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 CELA3BP08861 270 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 B4GALT1P15291 398 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 ZNF23P17027 643 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 FPR3P25089 353 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 SERPINF1P36955 418 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 DAP3P51398 398 aaKnown RBP13.31□□□□□ -0.28
NUP50-219ENST00000497960 ARHGDIAP52565 204 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 SNRPD2P62316 118 aaKnown RBP13.31□□□□□ -0.28
NUP50-219ENST00000497960 RPL18Q07020 188 aaKnown RBP13.31□□□□□ -0.28
NUP50-219ENST00000497960 GSG1Q2KHT4 349 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 ALG10Q5BKT4 473 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 VHLLQ6RSH7 139 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 ZNF627Q7L945 461 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 AMIGO2Q86SJ2 522 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 WDFY1Q8IWB7 410 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 OR51A7Q8NH64 312 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 RHNO1Q9BSD3 238 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 REG4Q9BYZ8 158 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 SEC61A2Q9H9S3 476 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 S100A14Q9HCY8 104 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 INIPQ9NRY2 104 aa13.31□□□□□ -0.28
NUP50-219ENST00000497960 PDP1Q9P0J1 537 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms