RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 MT-ND2P03891 347 aa21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 PIPP12273 146 aaPredicted RBP21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 ZNF133P52736 654 aaPredicted RBP21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 HCCSP53701 268 aa21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 GABARAPL2P60520 117 aa21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 DOC2BQ14184 412 aa21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 GGTLC2Q14390 218 aa21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 SLC35D3Q5M8T2 416 aa21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 THEM4Q5T1C6 240 aa21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 C1orf185Q5T7R7 199 aa21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 HDDC2Q7Z4H3 204 aa21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 MCEMP1Q8IX19 187 aa21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 NAXEQ8NCW5 288 aa21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 TSPAN14Q8NG11 270 aa21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 OR6N1Q8NGY5 312 aa21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 MBD3L2Q8NHZ7 208 aaPredicted RBP21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 INTS12Q96CB8 462 aaKnown RBP21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 GMPPAQ96IJ6 420 aaPredicted RBP21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 RACGAP1Q9H0H5 632 aa21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 CNOT2Q9NZN8 540 aaKnown RBP21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 EMC3Q9P0I2 261 aa21.43■■□□□ 1.02
TNFRSF4-203ENST00000497869 RELNP78509 3460 aa21.42■■□□□ 1.02
TNFRSF4-203ENST00000497869 CDK1P06493 297 aa21.42■■□□□ 1.02
TNFRSF4-203ENST00000497869 GABRA1P14867 456 aa21.42■■□□□ 1.02
TNFRSF4-203ENST00000497869 EEF1B2P24534 225 aaKnown RBP21.42■■□□□ 1.02
TNFRSF4-203ENST00000497869 KIR2DL2P43627 348 aaPredicted RBP21.42■■□□□ 1.02
TNFRSF4-203ENST00000497869 RBP7Q96R05 134 aa21.42■■□□□ 1.02
TNFRSF4-203ENST00000497869 ZNF649Q9BS31 505 aa21.42■■□□□ 1.02
TNFRSF4-203ENST00000497869 WDR76Q9H967 626 aa21.42■■□□□ 1.02
TNFRSF4-203ENST00000497869 EFCAB10A6NFE3 127 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 FIGNL2A6NMB9 653 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 CENPBD1B2RD01 187 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 MRPL33O75394 65 aaKnown RBP21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 SBK2P0C263 348 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 GAAP10253 952 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 CDAP32320 146 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 NAA10P41227 235 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 FOXG1P55316 489 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 MEP1BQ16820 701 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 NCCRP1Q6ZVX7 275 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 TIGD4Q8IY51 512 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 RFLNBQ8N5W9 214 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 BBC3Q96PG8 261 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 ALKBH3Q96Q83 286 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 C12orf49Q9H741 205 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 GP6Q9HCN6 339 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 SLC7A10Q9NS82 523 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 BLOC1S6Q9UL45 172 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 MOKQ9UQ07 419 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 COMMD3-BMI1R4GMX3 469 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 SLC43A1O75387 559 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 CRABP1P29762 137 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 RPS27P42677 84 aaKnown RBP21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 RAB40BQ12829 278 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 ZNF773Q6PK81 442 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 SPARTQ8N0X7 666 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 IPCEF1Q8WWN9 437 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 FGF20Q9NP95 211 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 CLEC2DQ9UHP7 191 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 PRSS50Q9UI38 385 aa21.41■■□□□ 1.02
TNFRSF4-203ENST00000497869 SHANK1Q9Y566 2161 aa21.4■■□□□ 1.02
TNFRSF4-203ENST00000497869 TRIM64CA6NLI5 447 aa21.4■■□□□ 1.02
TNFRSF4-203ENST00000497869 KHDRBS3O75525 346 aaKnown RBP21.4■■□□□ 1.02
TNFRSF4-203ENST00000497869 ATP6V1B1P15313 513 aa21.4■■□□□ 1.02
TNFRSF4-203ENST00000497869 MAP2K4P45985 399 aa21.4■■□□□ 1.02
TNFRSF4-203ENST00000497869 SIRPAP78324 504 aa21.4■■□□□ 1.02
TNFRSF4-203ENST00000497869 TMED1Q13445 227 aa21.4■■□□□ 1.02
TNFRSF4-203ENST00000497869 MED12LQ86YW9 2145 aa21.4■■□□□ 1.02
TNFRSF4-203ENST00000497869 SLC26A10Q8NG04 563 aa21.4■■□□□ 1.02
TNFRSF4-203ENST00000497869 MARCH7Q9H992 704 aa21.4■■□□□ 1.02
TNFRSF4-203ENST00000497869 SNTNA6NMZ2 147 aa21.39■■□□□ 1.01
TNFRSF4-203ENST00000497869 PRRG2O14669 202 aa21.39■■□□□ 1.01
TNFRSF4-203ENST00000497869 RGS10O43665 173 aa21.39■■□□□ 1.01
TNFRSF4-203ENST00000497869 AKAP8O43823 692 aaKnown RBP21.39■■□□□ 1.01
TNFRSF4-203ENST00000497869 TNFSF13O75888 250 aa21.39■■□□□ 1.01
TNFRSF4-203ENST00000497869 GLI4P10075 376 aa21.39■■□□□ 1.01
TNFRSF4-203ENST00000497869 PTGER4P35408 488 aa21.39■■□□□ 1.01
TNFRSF4-203ENST00000497869 IRF3Q14653 427 aa21.39■■□□□ 1.01
TNFRSF4-203ENST00000497869 C10orf128Q5T292 105 aa21.39■■□□□ 1.01
TNFRSF4-203ENST00000497869 VWA1Q6PCB0 445 aa21.39■■□□□ 1.01
TNFRSF4-203ENST00000497869 FAM214BQ7L5A3 538 aa21.39■■□□□ 1.01
TNFRSF4-203ENST00000497869 TTYH2Q9BSA4 534 aa21.39■■□□□ 1.01
TNFRSF4-203ENST00000497869 ULBP2Q9BZM5 246 aa21.39■■□□□ 1.01
TNFRSF4-203ENST00000497869 SLCO5A1Q9H2Y9 848 aa21.39■■□□□ 1.01
TNFRSF4-203ENST00000497869 CRLF2Q9HC73 371 aa21.39■■□□□ 1.01
TNFRSF4-203ENST00000497869 SH3BGRL2Q9UJC5 107 aa21.39■■□□□ 1.01
TNFRSF4-203ENST00000497869 ATXN7O15265 892 aaPredicted RBP21.38■■□□□ 1.01
TNFRSF4-203ENST00000497869 CD79BP40259 229 aa21.38■■□□□ 1.01
TNFRSF4-203ENST00000497869 CENPAP49450 140 aa21.38■■□□□ 1.01
TNFRSF4-203ENST00000497869 PRSS48Q7RTY5 328 aa21.38■■□□□ 1.01
TNFRSF4-203ENST00000497869 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.38■■□□□ 1.01
TNFRSF4-203ENST00000497869 STX19Q8N4C7 294 aa21.38■■□□□ 1.01
TNFRSF4-203ENST00000497869 TMEM80Q96HE8 168 aa21.38■■□□□ 1.01
TNFRSF4-203ENST00000497869 TBX5Q99593 518 aa21.38■■□□□ 1.01
TNFRSF4-203ENST00000497869 CCDC90BQ9GZT6 254 aa21.38■■□□□ 1.01
TNFRSF4-203ENST00000497869 TP63Q9H3D4 680 aaPredicted RBP21.38■■□□□ 1.01
TNFRSF4-203ENST00000497869 GLRX2Q9NS18 164 aa21.38■■□□□ 1.01
TNFRSF4-203ENST00000497869 DIMT1Q9UNQ2 313 aaKnown RBP21.38■■□□□ 1.01
TNFRSF4-203ENST00000497869 COPS3Q9UNS2 423 aa21.38■■□□□ 1.01
TNFRSF4-203ENST00000497869 KLHDC2Q9Y2U9 406 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms