RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 OPN4Q9UHM6 478 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 CYP8B1Q9UNU6 501 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 SLC6A5Q9Y345 797 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 HS3ST3A1Q9Y663 406 aa11.77□□□□□ -0.52
PTPN7-217ENST00000495688 KIF26BQ2KJY2 2108 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 FXYD6-FXYD2A0A087WZ82 144 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 PRAMEF26H0Y7S4 382 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 ICOSLGO75144 302 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 LDOC1O95751 146 aaPredicted RBP11.77□□□□□ -0.53
PTPN7-217ENST00000495688 TXNDC12O95881 172 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 CD3DP04234 171 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 IL5P05113 134 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 GTF2F2P13984 249 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 MAP2K6P52564 334 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 GFERP55789 205 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 SLC37A1P57057 533 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 DHODHQ02127 395 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 RBMS2Q15434 407 aaKnown RBP11.77□□□□□ -0.53
PTPN7-217ENST00000495688 SHHQ15465 462 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 EEF1A1P5Q5VTE0 462 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 NKAIN2Q5VXU1 208 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 ANKRD16Q6P6B7 361 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 COQ8AQ8NI60 647 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 ZNF417Q8TAU3 575 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.77□□□□□ -0.53
PTPN7-217ENST00000495688 TSLPQ969D9 159 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 SLC25A36Q96CQ1 311 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 C4orf45Q96LM5 186 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 LINC00052Q96N35 136 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 MRI1Q9BV20 369 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 LRRC61Q9BV99 259 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 FXYD6Q9H0Q3 95 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 ELOVL3Q9HB03 270 aa11.77□□□□□ -0.53
PTPN7-217ENST00000495688 TMEM272A0A1B0GTI8 110 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 TMEM212A6NML5 194 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 SNRPGP15A8MWD9 76 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 GOSR2O14653 212 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 HCRTR2O43614 444 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 SRPX2O60687 465 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-217ENST00000495688 MNDAP41218 407 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 SEC61A1P61619 476 aaKnown RBP11.76□□□□□ -0.53
PTPN7-217ENST00000495688 ZNF117Q03924 483 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 HLXQ14774 488 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-217ENST00000495688 C2orf76Q3KRA6 126 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 TMEM184AQ6ZMB5 413 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 ZNF440Q8IYI8 595 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 SDR16C5Q8N3Y7 309 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 DMRTA2Q96SC8 542 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 REG4Q9BYZ8 158 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 NKX2-4Q9H2Z4 354 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 MYEF2Q9P2K5 600 aaKnown RBP11.76□□□□□ -0.53
PTPN7-217ENST00000495688 NUP210LQ5VU65 1888 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 IGHV5-51A0A0C4DH38 117 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 CD1CP29017 333 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 OR1D4P47884 311 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 MECP2P51608 486 aaKnown RBP11.76□□□□□ -0.53
PTPN7-217ENST00000495688 PRAMEF17Q5VTA0 474 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 TMEM205Q6UW68 189 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 GPAT4Q86UL3 456 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 ADGRG3Q86Y34 549 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 OTOSQ8NHW6 89 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 STK35Q8TDR2 534 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 TOE1Q96GM8 510 aaKnown RBP11.76□□□□□ -0.53
PTPN7-217ENST00000495688 DCBLD2Q96PD2 775 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 SDHAF2Q9NX18 166 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 SOHLH2Q9NX45 425 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 KCNMB2Q9Y691 235 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 TMEM131Q92545 1883 aa11.76□□□□□ -0.53
PTPN7-217ENST00000495688 CHURC1-FNTBB4DL54 471 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 SMAD9O15198 467 aaKnown RBP11.75□□□□□ -0.53
PTPN7-217ENST00000495688 IL33O95760 270 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 NUDT14O95848 222 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 RENP00797 406 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 HIST1H2ABP04908 130 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 NMBP08949 121 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 FNTBP49356 437 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 HSD17B7P56937 341 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 HIST3H2AQ7L7L0 130 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 MARCH3Q86UD3 253 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 SPERTQ8NA61 448 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 HIST1H2ACQ93077 130 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 FAM3DQ96BQ1 224 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 ARL6Q9H0F7 186 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 ZMAT3Q9HA38 289 aaKnown RBP11.75□□□□□ -0.53
PTPN7-217ENST00000495688 TMEM138Q9NPI0 162 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 PRODH2Q9UF12 536 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 hCG_1807616A0A1W2PRN6 198 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 S100A11P31949 105 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 EFNA3P52797 238 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 DLX5P56178 289 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 EGR3Q06889 387 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 SQSTM1Q13501 440 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 TMUB2Q71RG4 321 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 PNPLA2Q96AD5 504 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 TGM7Q96PF1 710 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 S1PR5Q9H228 398 aa11.75□□□□□ -0.53
PTPN7-217ENST00000495688 CDV3Q9UKY7 258 aaKnown RBP11.75□□□□□ -0.53
PTPN7-217ENST00000495688 UBE2QL1A1L167 161 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 LGALS8O00214 317 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 LPLP06858 475 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms