RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 SPRY3O43610 288 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 ITM2AO43736 263 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 NDUFA7O95182 113 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 ETS2P15036 469 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 OMGP23515 440 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 HTR2AP28223 471 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 PRKAR1BP31321 381 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 RPL14P50914 215 aaKnown RBP11.32□□□□□ -0.6
COL1A1-209ENST00000495677 PLP2Q04941 152 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 RPS26P11Q5JNZ5 115 aaPredicted RBP11.32□□□□□ -0.6
COL1A1-209ENST00000495677 UNQ6126/PRO20091Q6UXV3 157 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 MIER2Q8N344 545 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 PARP8Q8N3A8 854 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 ZNF283Q8N7M2 679 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 UPRTQ96BW1 309 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 MARS2Q96GW9 593 aaKnown RBP11.32□□□□□ -0.6
COL1A1-209ENST00000495677 SLC25A44Q96H78 314 aaPredicted RBP11.32□□□□□ -0.6
COL1A1-209ENST00000495677 MOGAT1Q96PD6 335 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 SH3GL3Q99963 347 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 TMEM43Q9BTV4 400 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 OR51B6Q9H340 312 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 MEAF6Q9HAF1 191 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 NPHS2Q9NP85 383 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 A4GALTQ9NPC4 353 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 SLC6A13Q9NSD5 602 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 AIG1Q9NVV5 245 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 EGFL7Q9UHF1 273 aa11.32□□□□□ -0.6
COL1A1-209ENST00000495677 PLSCR5A0PG75 271 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 CLPSL1A2RUU4 121 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 FAM181BA6NEQ2 426 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 H3BSA7 217 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 SPAG7O75391 227 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 MT-ATP6P00846 226 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 IL6P05231 212 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 MMP7P09237 267 aaPredicted RBP11.31□□□□□ -0.6
COL1A1-209ENST00000495677 ALDOCP09972 364 aaKnown RBP11.31□□□□□ -0.6
COL1A1-209ENST00000495677 SBK2P0C263 348 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 BMP2P12643 396 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 AHCYP23526 432 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 CD80P33681 288 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 PCGF2P35227 344 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 BIDP55957 195 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 BPIFB3P59826 476 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 RPL15P61313 204 aaKnown RBP11.31□□□□□ -0.6
COL1A1-209ENST00000495677 PAX2Q02962 417 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 HIST3H3Q16695 136 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 TMEM255AQ5JRV8 349 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 ASPHD2Q6ICH7 369 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 SLC16A14Q7RTX9 510 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 NUDCD3Q8IVD9 361 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 OR5J2Q8NH18 312 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 ZNF566Q969W8 418 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 C16orf45Q96MC5 204 aaPredicted RBP11.31□□□□□ -0.6
COL1A1-209ENST00000495677 RBM4BQ9BQ04 359 aaKnown RBP11.31□□□□□ -0.6
COL1A1-209ENST00000495677 RHOXF2Q9BQY4 288 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 C20orf27Q9GZN8 174 aa11.31□□□□□ -0.6
COL1A1-209ENST00000495677 ZSCAN5BA6NJL1 495 aa11.3□□□□□ -0.6
COL1A1-209ENST00000495677 SRRM5B3KS81 715 aa11.3□□□□□ -0.6
COL1A1-209ENST00000495677 ICMTO60725 284 aa11.3□□□□□ -0.6
COL1A1-209ENST00000495677 ALX3O95076 343 aa11.3□□□□□ -0.6
COL1A1-209ENST00000495677 CRYBA1P05813 215 aa11.3□□□□□ -0.6
COL1A1-209ENST00000495677 IGHV4-38-2P0DP08 117 aa11.3□□□□□ -0.6
COL1A1-209ENST00000495677 APLNRP35414 380 aa11.3□□□□□ -0.6
COL1A1-209ENST00000495677 ABCE1P61221 599 aaKnown RBP11.3□□□□□ -0.6
COL1A1-209ENST00000495677 HLXQ14774 488 aaPredicted RBP11.3□□□□□ -0.6
COL1A1-209ENST00000495677 BRICD5Q6PL45 260 aa11.3□□□□□ -0.6
COL1A1-209ENST00000495677 LRRN1Q6UXK5 716 aa11.3□□□□□ -0.6
COL1A1-209ENST00000495677 LINC00114Q6XXX2 140 aa11.3□□□□□ -0.6
COL1A1-209ENST00000495677 SLC35D2Q76EJ3 337 aa11.3□□□□□ -0.6
COL1A1-209ENST00000495677 RBM15BQ8NDT2 890 aaKnown RBP11.3□□□□□ -0.6
COL1A1-209ENST00000495677 BHLHE22Q8NFJ8 381 aaPredicted RBP11.3□□□□□ -0.6
COL1A1-209ENST00000495677 OR4K5Q8NGD3 323 aa11.3□□□□□ -0.6
COL1A1-209ENST00000495677 BBS10Q8TAM1 723 aa11.3□□□□□ -0.6
COL1A1-209ENST00000495677 KLF14Q8TD94 323 aaPredicted RBP11.3□□□□□ -0.6
COL1A1-209ENST00000495677 POM121L2Q96KW2 1035 aa11.3□□□□□ -0.6
COL1A1-209ENST00000495677 SAMD8Q96LT4 415 aa11.3□□□□□ -0.6
COL1A1-209ENST00000495677 SLC19A3Q9BZV2 496 aa11.3□□□□□ -0.6
COL1A1-209ENST00000495677 TMEM106BQ9NUM4 274 aa11.3□□□□□ -0.6
COL1A1-209ENST00000495677 C1RLQ9NZP8 487 aa11.3□□□□□ -0.6
COL1A1-209ENST00000495677 LRCH1Q9Y2L9 728 aa11.3□□□□□ -0.6
COL1A1-209ENST00000495677 A0A0B4J2E0 115 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 A0A1B0GX12 115 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 TLDC2A0PJX2 215 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 HOXA3O43365 443 aaPredicted RBP11.29□□□□□ -0.6
COL1A1-209ENST00000495677 TYROBPO43914 113 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 CLPXO76031 633 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 GPANK1O95872 356 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 SERPINE1P05121 402 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 WNT2P09544 360 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 PGA4P0DJD7 388 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 PGA3P0DJD8 388 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 ADORA3P0DMS8 318 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 SELEP16581 610 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 MPV17P39210 176 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 ZNF133P52736 654 aaPredicted RBP11.29□□□□□ -0.6
COL1A1-209ENST00000495677 RAG2P55895 527 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 SEC61A1P61619 476 aaKnown RBP11.29□□□□□ -0.6
COL1A1-209ENST00000495677 RELBQ01201 579 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 CDK5R2Q13319 367 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 RGNQ15493 299 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms