RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 OR6Q1Q8NGQ2 317 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 ASB17Q8WXJ9 295 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 TMEM54Q969K7 222 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 INTS12Q96CB8 462 aaKnown RBP6.05□□□□□ -1.44
MSH5-217ENST00000494458 ZHX1-C8orf76Q96EF9 292 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 OR5B2Q96R09 309 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 NAA11Q9BSU3 229 aaPredicted RBP6.05□□□□□ -1.44
MSH5-217ENST00000494458 DCUN1D5Q9BTE7 237 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 TTTY12Q9BZ98 90 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 MMP27Q9H306 513 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 ZDHHC11Q9H8X9 412 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 WDR76Q9H967 626 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 RNF122Q9H9V4 155 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 TRIM36Q9NQ86 728 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 ANKRD10Q9NXR5 420 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 DKK4Q9UBT3 224 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 MRM2Q9UI43 246 aaKnown RBP6.05□□□□□ -1.44
MSH5-217ENST00000494458 FOXD3Q9UJU5 478 aaPredicted RBP6.05□□□□□ -1.44
MSH5-217ENST00000494458 DKKL1Q9UK85 242 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 SSR3Q9UNL2 185 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 KLF13Q9Y2Y9 288 aaPredicted RBP6.05□□□□□ -1.44
MSH5-217ENST00000494458 KCNMB2Q9Y691 235 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 TMEM14AQ9Y6G1 99 aa6.05□□□□□ -1.44
MSH5-217ENST00000494458 A0A1B0GVC2 190 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 ANKRD61A6NGH8 418 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 ARGFXA6NJG6 315 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 ZNF891A8MT65 544 aaPredicted RBP6.04□□□□□ -1.44
MSH5-217ENST00000494458 NPIPA5E9PKD4 350 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 G3V3Y1 287 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 H7C1C5 153 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 ZNF593O00488 134 aaPredicted RBP6.04□□□□□ -1.44
MSH5-217ENST00000494458 SMAD9O15198 467 aaKnown RBP6.04□□□□□ -1.44
MSH5-217ENST00000494458 GPRIN2O60269 458 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 SLC16A7O60669 478 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 CYTIPO60759 359 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 KHDRBS3O75525 346 aaKnown RBP6.04□□□□□ -1.44
MSH5-217ENST00000494458 IGHG3P01860 377 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 MRPL3P09001 348 aaKnown RBP6.04□□□□□ -1.44
MSH5-217ENST00000494458 CPN1P15169 458 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 ZNF708P17019 499 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 CELP19835 753 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 KLK2P20151 261 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 CTSSP25774 331 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 NTF4P34130 210 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 CCR9P51686 369 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 BMXP51813 675 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 CLDN20P56880 219 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 OR2B6P58173 313 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 GPR85P60893 370 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 RPS7P62081 194 aaKnown RBP6.04□□□□□ -1.44
MSH5-217ENST00000494458 LCN6P62502 163 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 HIST1H3AP68431 136 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 OC90Q02509 493 aaPredicted RBP6.04□□□□□ -1.44
MSH5-217ENST00000494458 POU3F1Q03052 451 aaPredicted RBP6.04□□□□□ -1.44
MSH5-217ENST00000494458 GLO1Q04760 184 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 CDC20Q12834 499 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 CDK5R1Q15078 307 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 STK11Q15831 433 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 ETFDHQ16134 617 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 ZNF829Q3KNS6 432 aaPredicted RBP6.04□□□□□ -1.44
MSH5-217ENST00000494458 ZNF404Q494X3 552 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 HIST2H3PS2Q5TEC6 136 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 TMEM225Q6GV28 225 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 DNM1P34Q6PK57 102 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 HIST2H3AQ71DI3 136 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 ADGRE4PQ86SQ3 457 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 YRDCQ86U90 279 aaKnown RBP6.04□□□□□ -1.44
MSH5-217ENST00000494458 VASH2Q86V25 355 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 ZNF679Q8IYX0 411 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 TMEM251Q8N6I4 163 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 ATP6V1C2Q8NEY4 427 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 OR2V1Q8NHB1 315 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 SNIP1Q8TAD8 396 aaKnown RBP6.04□□□□□ -1.44
MSH5-217ENST00000494458 ABHD4Q8TB40 342 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 ST7LQ8TDW4 575 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 SMAP2Q8WU79 429 aaPredicted RBP6.04□□□□□ -1.44
MSH5-217ENST00000494458 SLC25A46Q96AG3 418 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 TMEM45BQ96B21 275 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 OTULINQ96BN8 352 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 SMIM19Q96E16 107 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 MRPL48Q96GC5 212 aaKnown RBP6.04□□□□□ -1.44
MSH5-217ENST00000494458 C4orf36Q96KX1 117 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 RBP7Q96R05 134 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 DCLRE1CQ96SD1 692 aaKnown RBP6.04□□□□□ -1.44
MSH5-217ENST00000494458 INTS14Q96SY0 518 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 TM9SF2Q99805 663 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 CHCHD6Q9BRQ6 235 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 HES7Q9BYE0 225 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 SRXN1Q9BYN0 137 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 BARHL1Q9BZE3 327 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 RNF167Q9H6Y7 350 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 AKIP1Q9NQ31 210 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 MED29Q9NX70 200 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 PLA2G3Q9NZ20 509 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 CYB5R1Q9UHQ9 305 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 KCNG2Q9UJ96 466 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 NPIPA1Q9UND3 350 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 RCE1Q9Y256 329 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 KLHDC2Q9Y2U9 406 aa6.04□□□□□ -1.44
MSH5-217ENST00000494458 UGT2A1Q9Y4X1 527 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms